Protein–RNA interactions for Protein: Q9H6I2

SOX17, Transcription factor SOX-17, humanhuman

Predicted RBP Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17Q9H6I2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SOX17Q9H6I2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SOX17Q9H6I2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SOX17Q9H6I2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SOX17Q9H6I2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.27■□□□□ 0.84
SOX17Q9H6I2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SOX17Q9H6I2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SOX17Q9H6I2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.27■□□□□ 0.84
SOX17Q9H6I2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SOX17Q9H6I2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.27■□□□□ 0.84
SOX17Q9H6I2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SOX17Q9H6I2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.27■□□□□ 0.84
SOX17Q9H6I2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SOX17Q9H6I2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SOX17Q9H6I2 OR7E47P-201ENST00000546390 1422 ntBASIC20.27■□□□□ 0.83
SOX17Q9H6I2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SOX17Q9H6I2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SOX17Q9H6I2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SOX17Q9H6I2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.26■□□□□ 0.83
SOX17Q9H6I2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.26■□□□□ 0.83
SOX17Q9H6I2 AL121603.2-201ENST00000557373 2117 ntBASIC20.26■□□□□ 0.83
SOX17Q9H6I2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.26■□□□□ 0.83
SOX17Q9H6I2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.26■□□□□ 0.83
SOX17Q9H6I2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SOX17Q9H6I2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.26■□□□□ 0.83
SOX17Q9H6I2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
SOX17Q9H6I2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.26■□□□□ 0.83
SOX17Q9H6I2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SOX17Q9H6I2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SOX17Q9H6I2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SOX17Q9H6I2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.26■□□□□ 0.83
SOX17Q9H6I2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SOX17Q9H6I2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.26■□□□□ 0.83
SOX17Q9H6I2 AP004607.7-201ENST00000527152 1677 ntBASIC20.26■□□□□ 0.83
SOX17Q9H6I2 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SOX17Q9H6I2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SOX17Q9H6I2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SOX17Q9H6I2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SOX17Q9H6I2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.25■□□□□ 0.83
SOX17Q9H6I2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SOX17Q9H6I2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SOX17Q9H6I2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.25■□□□□ 0.83
SOX17Q9H6I2 AC137761.2-201ENST00000561729 223 ntBASIC20.25■□□□□ 0.83
SOX17Q9H6I2 AC145350.3-201ENST00000569033 163 ntBASIC20.25■□□□□ 0.83
SOX17Q9H6I2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SOX17Q9H6I2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SOX17Q9H6I2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SOX17Q9H6I2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SOX17Q9H6I2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SOX17Q9H6I2 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
SOX17Q9H6I2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.24■□□□□ 0.83
SOX17Q9H6I2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SOX17Q9H6I2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SOX17Q9H6I2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
SOX17Q9H6I2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SOX17Q9H6I2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SOX17Q9H6I2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.24■□□□□ 0.83
SOX17Q9H6I2 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.24■□□□□ 0.83
SOX17Q9H6I2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.24■□□□□ 0.83
SOX17Q9H6I2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SOX17Q9H6I2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.24■□□□□ 0.83
SOX17Q9H6I2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.24■□□□□ 0.83
SOX17Q9H6I2 RARRES2P11-201ENST00000635158 484 ntBASIC20.24■□□□□ 0.83
SOX17Q9H6I2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SOX17Q9H6I2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SOX17Q9H6I2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.24■□□□□ 0.83
SOX17Q9H6I2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SOX17Q9H6I2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SOX17Q9H6I2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SOX17Q9H6I2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SOX17Q9H6I2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SOX17Q9H6I2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SOX17Q9H6I2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SOX17Q9H6I2 AC016769.1-201ENST00000409132 1010 ntBASIC20.23■□□□□ 0.83
SOX17Q9H6I2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.23■□□□□ 0.83
SOX17Q9H6I2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.23■□□□□ 0.83
SOX17Q9H6I2 AC090192.1-201ENST00000517740 490 ntBASIC20.23■□□□□ 0.83
SOX17Q9H6I2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SOX17Q9H6I2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SOX17Q9H6I2 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SOX17Q9H6I2 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SOX17Q9H6I2 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SOX17Q9H6I2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SOX17Q9H6I2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOX17Q9H6I2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOX17Q9H6I2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOX17Q9H6I2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SOX17Q9H6I2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.22■□□□□ 0.83
SOX17Q9H6I2 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.22■□□□□ 0.83
SOX17Q9H6I2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.22■□□□□ 0.83
SOX17Q9H6I2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOX17Q9H6I2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOX17Q9H6I2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SOX17Q9H6I2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOX17Q9H6I2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOX17Q9H6I2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.22■□□□□ 0.83
SOX17Q9H6I2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.22■□□□□ 0.83
SOX17Q9H6I2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.22■□□□□ 0.83
SOX17Q9H6I2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SOX17Q9H6I2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms