Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MAP1LC3AQ9H492 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MAP1LC3AQ9H492 RPS2-202ENST00000526522 924 ntTSL 2 BASIC15.28■□□□□ 0.04
MAP1LC3AQ9H492 AC079089.2-201ENST00000531211 1277 ntBASIC15.28■□□□□ 0.04
MAP1LC3AQ9H492 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC15.28■□□□□ 0.04
MAP1LC3AQ9H492 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
MAP1LC3AQ9H492 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MAP1LC3AQ9H492 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MAP1LC3AQ9H492 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MAP1LC3AQ9H492 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MAP1LC3AQ9H492 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MAP1LC3AQ9H492 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MAP1LC3AQ9H492 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MAP1LC3AQ9H492 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MAP1LC3AQ9H492 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC15.28■□□□□ 0.04
MAP1LC3AQ9H492 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MAP1LC3AQ9H492 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC15.27■□□□□ 0.04
MAP1LC3AQ9H492 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.27■□□□□ 0.04
MAP1LC3AQ9H492 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
MAP1LC3AQ9H492 AFG3L1P-217ENST00000557444 2447 ntBASIC15.27■□□□□ 0.04
MAP1LC3AQ9H492 OR7E47P-201ENST00000546390 1422 ntBASIC15.27■□□□□ 0.04
MAP1LC3AQ9H492 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MAP1LC3AQ9H492 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MAP1LC3AQ9H492 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
MAP1LC3AQ9H492 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.27■□□□□ 0.04
MAP1LC3AQ9H492 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MAP1LC3AQ9H492 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.27■□□□□ 0.04
MAP1LC3AQ9H492 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MAP1LC3AQ9H492 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.27■□□□□ 0.04
MAP1LC3AQ9H492 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MAP1LC3AQ9H492 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MAP1LC3AQ9H492 PCDHAC2-203ENST00000615316 3011 ntBASIC15.27■□□□□ 0.04
MAP1LC3AQ9H492 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC15.27■□□□□ 0.04
MAP1LC3AQ9H492 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.27■□□□□ 0.03
MAP1LC3AQ9H492 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
MAP1LC3AQ9H492 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MAP1LC3AQ9H492 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.27■□□□□ 0.03
MAP1LC3AQ9H492 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
MAP1LC3AQ9H492 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.27■□□□□ 0.03
MAP1LC3AQ9H492 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
MAP1LC3AQ9H492 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
MAP1LC3AQ9H492 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MAP1LC3AQ9H492 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MAP1LC3AQ9H492 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 ME2-218ENST00000640965 2476 ntTSL 5 BASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 RNF126P1-201ENST00000567452 1320 ntBASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC15.26■□□□□ 0.03
MAP1LC3AQ9H492 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC15.25■□□□□ 0.03
MAP1LC3AQ9H492 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.25■□□□□ 0.03
MAP1LC3AQ9H492 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
MAP1LC3AQ9H492 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MAP1LC3AQ9H492 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MAP1LC3AQ9H492 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC15.25■□□□□ 0.03
MAP1LC3AQ9H492 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MAP1LC3AQ9H492 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MAP1LC3AQ9H492 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC15.25■□□□□ 0.03
MAP1LC3AQ9H492 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MAP1LC3AQ9H492 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MAP1LC3AQ9H492 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
MAP1LC3AQ9H492 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
MAP1LC3AQ9H492 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MAP1LC3AQ9H492 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MAP1LC3AQ9H492 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC15.25■□□□□ 0.03
MAP1LC3AQ9H492 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
MAP1LC3AQ9H492 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MAP1LC3AQ9H492 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC15.25■□□□□ 0.03
MAP1LC3AQ9H492 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
MAP1LC3AQ9H492 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MAP1LC3AQ9H492 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MAP1LC3AQ9H492 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MAP1LC3AQ9H492 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MAP1LC3AQ9H492 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MAP1LC3AQ9H492 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms