Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF39Q9H2S5 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.02■■□□□ 1.28
RNF39Q9H2S5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.01■■□□□ 1.27
RNF39Q9H2S5 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF39Q9H2S5 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF39Q9H2S5 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF39Q9H2S5 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF39Q9H2S5 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF39Q9H2S5 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.01■■□□□ 1.27
RNF39Q9H2S5 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF39Q9H2S5 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF39Q9H2S5 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF39Q9H2S5 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF39Q9H2S5 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF39Q9H2S5 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF39Q9H2S5 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF39Q9H2S5 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC23.01■■□□□ 1.27
RNF39Q9H2S5 SEPHS1P7-201ENST00000452995 1177 ntBASIC23.01■■□□□ 1.27
RNF39Q9H2S5 ART2BP-201ENST00000453501 499 ntBASIC23.01■■□□□ 1.27
RNF39Q9H2S5 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF39Q9H2S5 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC23.01■■□□□ 1.27
RNF39Q9H2S5 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.01■■□□□ 1.27
RNF39Q9H2S5 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
RNF39Q9H2S5 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.01■■□□□ 1.27
RNF39Q9H2S5 AC005181.1-201ENST00000604782 1256 ntBASIC23.01■■□□□ 1.27
RNF39Q9H2S5 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF39Q9H2S5 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF39Q9H2S5 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF39Q9H2S5 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF39Q9H2S5 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
RNF39Q9H2S5 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
RNF39Q9H2S5 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23■■□□□ 1.27
RNF39Q9H2S5 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RNF39Q9H2S5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23■■□□□ 1.27
RNF39Q9H2S5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23■■□□□ 1.27
RNF39Q9H2S5 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23■■□□□ 1.27
RNF39Q9H2S5 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23■■□□□ 1.27
RNF39Q9H2S5 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
RNF39Q9H2S5 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23■■□□□ 1.27
RNF39Q9H2S5 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23■■□□□ 1.27
RNF39Q9H2S5 AL158050.2-201ENST00000605336 568 ntBASIC23■■□□□ 1.27
RNF39Q9H2S5 AC093648.1-201ENST00000623546 606 ntBASIC23■■□□□ 1.27
RNF39Q9H2S5 AC006963.1-201ENST00000624003 1052 ntBASIC23■■□□□ 1.27
RNF39Q9H2S5 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
RNF39Q9H2S5 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RNF39Q9H2S5 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23■■□□□ 1.27
RNF39Q9H2S5 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23■■□□□ 1.27
RNF39Q9H2S5 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RNF39Q9H2S5 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.99■■□□□ 1.27
RNF39Q9H2S5 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.99■■□□□ 1.27
RNF39Q9H2S5 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.99■■□□□ 1.27
RNF39Q9H2S5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
RNF39Q9H2S5 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF39Q9H2S5 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC22.99■■□□□ 1.27
RNF39Q9H2S5 GPX1P1-201ENST00000388829 606 ntBASIC22.99■■□□□ 1.27
RNF39Q9H2S5 AC083906.2-201ENST00000511578 360 ntBASIC22.99■■□□□ 1.27
RNF39Q9H2S5 SLC7A5P1-201ENST00000568957 537 ntBASIC22.99■■□□□ 1.27
RNF39Q9H2S5 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC22.99■■□□□ 1.27
RNF39Q9H2S5 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.99■■□□□ 1.27
RNF39Q9H2S5 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.99■■□□□ 1.27
RNF39Q9H2S5 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.99■■□□□ 1.27
RNF39Q9H2S5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF39Q9H2S5 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF39Q9H2S5 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.98■■□□□ 1.27
RNF39Q9H2S5 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RNF39Q9H2S5 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
RNF39Q9H2S5 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF39Q9H2S5 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF39Q9H2S5 OR2X1P-201ENST00000421144 687 ntBASIC22.98■■□□□ 1.27
RNF39Q9H2S5 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.98■■□□□ 1.27
RNF39Q9H2S5 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.98■■□□□ 1.27
RNF39Q9H2S5 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.98■■□□□ 1.27
RNF39Q9H2S5 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC22.98■■□□□ 1.27
RNF39Q9H2S5 GAMT-205ENST00000640762 751 ntTSL 5 BASIC22.98■■□□□ 1.27
RNF39Q9H2S5 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.98■■□□□ 1.27
RNF39Q9H2S5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
RNF39Q9H2S5 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.98■■□□□ 1.27
RNF39Q9H2S5 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF39Q9H2S5 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF39Q9H2S5 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF39Q9H2S5 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
RNF39Q9H2S5 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RNF39Q9H2S5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF39Q9H2S5 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
RNF39Q9H2S5 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF39Q9H2S5 AL355802.2-201ENST00000402069 882 ntBASIC22.97■■□□□ 1.27
RNF39Q9H2S5 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22.97■■□□□ 1.27
RNF39Q9H2S5 HAUS1P1-201ENST00000505275 832 ntBASIC22.97■■□□□ 1.27
RNF39Q9H2S5 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.97■■□□□ 1.27
RNF39Q9H2S5 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF39Q9H2S5 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC22.97■■□□□ 1.27
RNF39Q9H2S5 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF39Q9H2S5 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.97■■□□□ 1.27
RNF39Q9H2S5 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.97■■□□□ 1.27
RNF39Q9H2S5 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RNF39Q9H2S5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.96■■□□□ 1.27
RNF39Q9H2S5 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF39Q9H2S5 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF39Q9H2S5 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RNF39Q9H2S5 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms