Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
VPS11Q9H270 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VPS11Q9H270 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
VPS11Q9H270 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VPS11Q9H270 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
VPS11Q9H270 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VPS11Q9H270 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
VPS11Q9H270 AC131281.2-201ENST00000520478 145 ntBASIC21.03■□□□□ 0.96
VPS11Q9H270 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VPS11Q9H270 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.03■□□□□ 0.96
VPS11Q9H270 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.03■□□□□ 0.96
VPS11Q9H270 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
VPS11Q9H270 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VPS11Q9H270 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.03■□□□□ 0.96
VPS11Q9H270 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VPS11Q9H270 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VPS11Q9H270 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
VPS11Q9H270 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VPS11Q9H270 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
VPS11Q9H270 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.02■□□□□ 0.96
VPS11Q9H270 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.02■□□□□ 0.96
VPS11Q9H270 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS11Q9H270 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS11Q9H270 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VPS11Q9H270 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
VPS11Q9H270 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.02■□□□□ 0.96
VPS11Q9H270 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS11Q9H270 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS11Q9H270 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS11Q9H270 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS11Q9H270 AP006587.3-201ENST00000525742 1516 ntBASIC21.02■□□□□ 0.96
VPS11Q9H270 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS11Q9H270 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS11Q9H270 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS11Q9H270 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
VPS11Q9H270 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.95
VPS11Q9H270 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.01■□□□□ 0.95
VPS11Q9H270 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.01■□□□□ 0.95
VPS11Q9H270 AP005212.1-201ENST00000581547 1997 ntBASIC21.01■□□□□ 0.95
VPS11Q9H270 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.01■□□□□ 0.95
VPS11Q9H270 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VPS11Q9H270 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.01■□□□□ 0.95
VPS11Q9H270 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VPS11Q9H270 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.01■□□□□ 0.95
VPS11Q9H270 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VPS11Q9H270 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VPS11Q9H270 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VPS11Q9H270 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.01■□□□□ 0.95
VPS11Q9H270 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
VPS11Q9H270 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VPS11Q9H270 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21■□□□□ 0.95
VPS11Q9H270 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VPS11Q9H270 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21■□□□□ 0.95
VPS11Q9H270 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21■□□□□ 0.95
VPS11Q9H270 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21■□□□□ 0.95
VPS11Q9H270 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21■□□□□ 0.95
VPS11Q9H270 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21■□□□□ 0.95
VPS11Q9H270 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VPS11Q9H270 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VPS11Q9H270 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VPS11Q9H270 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21■□□□□ 0.95
VPS11Q9H270 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21■□□□□ 0.95
VPS11Q9H270 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS11Q9H270 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS11Q9H270 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS11Q9H270 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
VPS11Q9H270 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS11Q9H270 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.99■□□□□ 0.95
VPS11Q9H270 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.99■□□□□ 0.95
VPS11Q9H270 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VPS11Q9H270 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS11Q9H270 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.99■□□□□ 0.95
VPS11Q9H270 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS11Q9H270 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS11Q9H270 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS11Q9H270 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS11Q9H270 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.98■□□□□ 0.95
VPS11Q9H270 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS11Q9H270 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.98■□□□□ 0.95
VPS11Q9H270 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.98■□□□□ 0.95
VPS11Q9H270 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.98■□□□□ 0.95
VPS11Q9H270 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.98■□□□□ 0.95
VPS11Q9H270 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS11Q9H270 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.98■□□□□ 0.95
VPS11Q9H270 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS11Q9H270 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS11Q9H270 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS11Q9H270 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS11Q9H270 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.97■□□□□ 0.95
VPS11Q9H270 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS11Q9H270 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS11Q9H270 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS11Q9H270 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS11Q9H270 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS11Q9H270 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS11Q9H270 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS11Q9H270 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
VPS11Q9H270 AC006128.1-201ENST00000624704 1661 ntBASIC20.97■□□□□ 0.95
VPS11Q9H270 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS11Q9H270 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms