Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDH23Q9H251 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDH23Q9H251 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDH23Q9H251 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.54■■□□□ 1.2
CDH23Q9H251 AC092865.7-201ENST00000641832 219 ntBASIC22.54■■□□□ 1.2
CDH23Q9H251 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
CDH23Q9H251 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC22.54■■□□□ 1.2
CDH23Q9H251 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDH23Q9H251 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC22.53■■□□□ 1.2
CDH23Q9H251 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDH23Q9H251 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDH23Q9H251 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC22.53■■□□□ 1.2
CDH23Q9H251 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC22.53■■□□□ 1.2
CDH23Q9H251 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.53■■□□□ 1.2
CDH23Q9H251 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.53■■□□□ 1.2
CDH23Q9H251 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.53■■□□□ 1.2
CDH23Q9H251 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDH23Q9H251 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDH23Q9H251 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.53■■□□□ 1.2
CDH23Q9H251 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDH23Q9H251 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
CDH23Q9H251 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDH23Q9H251 TPM1-226ENST00000560959 925 ntTSL 2 BASIC22.53■■□□□ 1.2
CDH23Q9H251 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC22.53■■□□□ 1.2
CDH23Q9H251 BRWD1-AS2-201ENST00000603064 1028 ntBASIC22.53■■□□□ 1.2
CDH23Q9H251 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.53■■□□□ 1.2
CDH23Q9H251 KRT16P2-201ENST00000414673 1423 ntBASIC22.52■■□□□ 1.2
CDH23Q9H251 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CDH23Q9H251 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.52■■□□□ 1.2
CDH23Q9H251 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
CDH23Q9H251 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC22.52■■□□□ 1.2
CDH23Q9H251 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC22.52■■□□□ 1.2
CDH23Q9H251 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC22.52■■□□□ 1.2
CDH23Q9H251 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.52■■□□□ 1.2
CDH23Q9H251 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CDH23Q9H251 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
CDH23Q9H251 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
CDH23Q9H251 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC22.52■■□□□ 1.19
CDH23Q9H251 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
CDH23Q9H251 NME6-213ENST00000451657 871 ntTSL 2 BASIC22.52■■□□□ 1.19
CDH23Q9H251 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC22.52■■□□□ 1.19
CDH23Q9H251 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
CDH23Q9H251 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC22.51■■□□□ 1.19
CDH23Q9H251 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDH23Q9H251 DHDH-203ENST00000522614 776 ntTSL 5 BASIC22.51■■□□□ 1.19
CDH23Q9H251 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
CDH23Q9H251 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDH23Q9H251 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDH23Q9H251 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDH23Q9H251 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CDH23Q9H251 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CDH23Q9H251 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CDH23Q9H251 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CDH23Q9H251 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC22.5■■□□□ 1.19
CDH23Q9H251 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CDH23Q9H251 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.5■■□□□ 1.19
CDH23Q9H251 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDH23Q9H251 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC22.5■■□□□ 1.19
CDH23Q9H251 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC22.5■■□□□ 1.19
CDH23Q9H251 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDH23Q9H251 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.5■■□□□ 1.19
CDH23Q9H251 POM121L13P-201ENST00000422362 380 ntBASIC22.5■■□□□ 1.19
CDH23Q9H251 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC22.5■■□□□ 1.19
CDH23Q9H251 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDH23Q9H251 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDH23Q9H251 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDH23Q9H251 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDH23Q9H251 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDH23Q9H251 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
CDH23Q9H251 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.49■■□□□ 1.19
CDH23Q9H251 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.49■■□□□ 1.19
CDH23Q9H251 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDH23Q9H251 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDH23Q9H251 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
CDH23Q9H251 AC053503.5-201ENST00000601508 636 ntBASIC22.49■■□□□ 1.19
CDH23Q9H251 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDH23Q9H251 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC22.48■■□□□ 1.19
CDH23Q9H251 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
CDH23Q9H251 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDH23Q9H251 LSM12P1-201ENST00000411836 588 ntBASIC22.48■■□□□ 1.19
CDH23Q9H251 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC22.48■■□□□ 1.19
CDH23Q9H251 KRT17P2-201ENST00000300992 1314 ntBASIC22.48■■□□□ 1.19
CDH23Q9H251 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
CDH23Q9H251 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDH23Q9H251 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDH23Q9H251 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC22.48■■□□□ 1.19
CDH23Q9H251 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDH23Q9H251 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.47■■□□□ 1.19
CDH23Q9H251 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC22.47■■□□□ 1.19
CDH23Q9H251 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDH23Q9H251 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CDH23Q9H251 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC22.47■■□□□ 1.19
CDH23Q9H251 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDH23Q9H251 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDH23Q9H251 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.47■■□□□ 1.19
CDH23Q9H251 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC22.47■■□□□ 1.19
CDH23Q9H251 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDH23Q9H251 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC22.47■■□□□ 1.19
CDH23Q9H251 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDH23Q9H251 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms