Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.81■■□□□ 1.08
DDX47Q9H0S4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
DDX47Q9H0S4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.81■■□□□ 1.08
DDX47Q9H0S4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.81■■□□□ 1.08
DDX47Q9H0S4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.8■■□□□ 1.08
DDX47Q9H0S4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.8■■□□□ 1.08
DDX47Q9H0S4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX47Q9H0S4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX47Q9H0S4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.8■■□□□ 1.08
DDX47Q9H0S4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX47Q9H0S4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
DDX47Q9H0S4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.8■■□□□ 1.08
DDX47Q9H0S4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
DDX47Q9H0S4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.8■■□□□ 1.08
DDX47Q9H0S4 SYT6-210ENST00000641643 1587 ntBASIC21.8■■□□□ 1.08
DDX47Q9H0S4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.8■■□□□ 1.08
DDX47Q9H0S4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.8■■□□□ 1.08
DDX47Q9H0S4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.8■■□□□ 1.08
DDX47Q9H0S4 AC136469.2-201ENST00000623944 1028 ntBASIC21.8■■□□□ 1.08
DDX47Q9H0S4 AL035685.1-201ENST00000636663 812 ntBASIC21.8■■□□□ 1.08
DDX47Q9H0S4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX47Q9H0S4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX47Q9H0S4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
DDX47Q9H0S4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.8■■□□□ 1.08
DDX47Q9H0S4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX47Q9H0S4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
DDX47Q9H0S4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
DDX47Q9H0S4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
DDX47Q9H0S4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
DDX47Q9H0S4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX47Q9H0S4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.79■■□□□ 1.08
DDX47Q9H0S4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.79■■□□□ 1.08
DDX47Q9H0S4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
DDX47Q9H0S4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.79■■□□□ 1.08
DDX47Q9H0S4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
DDX47Q9H0S4 AL138724.1-201ENST00000606771 1088 ntBASIC21.79■■□□□ 1.08
DDX47Q9H0S4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX47Q9H0S4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX47Q9H0S4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
DDX47Q9H0S4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX47Q9H0S4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.79■■□□□ 1.08
DDX47Q9H0S4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX47Q9H0S4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX47Q9H0S4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX47Q9H0S4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX47Q9H0S4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DDX47Q9H0S4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX47Q9H0S4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX47Q9H0S4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
DDX47Q9H0S4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DDX47Q9H0S4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DDX47Q9H0S4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
DDX47Q9H0S4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.78■■□□□ 1.08
DDX47Q9H0S4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.78■■□□□ 1.08
DDX47Q9H0S4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DDX47Q9H0S4 AC027702.1-201ENST00000563810 1770 ntBASIC21.78■■□□□ 1.08
DDX47Q9H0S4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DDX47Q9H0S4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX47Q9H0S4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX47Q9H0S4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX47Q9H0S4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
DDX47Q9H0S4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
DDX47Q9H0S4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.77■■□□□ 1.08
DDX47Q9H0S4 AFG3L1P-217ENST00000557444 2447 ntBASIC21.77■■□□□ 1.08
DDX47Q9H0S4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
DDX47Q9H0S4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX47Q9H0S4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
DDX47Q9H0S4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX47Q9H0S4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
DDX47Q9H0S4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.77■■□□□ 1.08
DDX47Q9H0S4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
DDX47Q9H0S4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
DDX47Q9H0S4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
DDX47Q9H0S4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
DDX47Q9H0S4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.77■■□□□ 1.07
DDX47Q9H0S4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX47Q9H0S4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX47Q9H0S4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX47Q9H0S4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX47Q9H0S4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.76■■□□□ 1.07
DDX47Q9H0S4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX47Q9H0S4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX47Q9H0S4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
DDX47Q9H0S4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX47Q9H0S4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
DDX47Q9H0S4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX47Q9H0S4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX47Q9H0S4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX47Q9H0S4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.76■■□□□ 1.07
DDX47Q9H0S4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
DDX47Q9H0S4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
DDX47Q9H0S4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX47Q9H0S4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.75■■□□□ 1.07
DDX47Q9H0S4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
DDX47Q9H0S4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.75■■□□□ 1.07
DDX47Q9H0S4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX47Q9H0S4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX47Q9H0S4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX47Q9H0S4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.75■■□□□ 1.07
DDX47Q9H0S4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms