Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM62Q9BVG3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM62Q9BVG3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM62Q9BVG3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
TRIM62Q9BVG3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.89■■□□□ 1.1
TRIM62Q9BVG3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
TRIM62Q9BVG3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM62Q9BVG3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM62Q9BVG3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.89■■□□□ 1.09
TRIM62Q9BVG3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
TRIM62Q9BVG3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.89■■□□□ 1.09
TRIM62Q9BVG3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.89■■□□□ 1.09
TRIM62Q9BVG3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM62Q9BVG3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM62Q9BVG3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM62Q9BVG3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM62Q9BVG3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM62Q9BVG3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.88■■□□□ 1.09
TRIM62Q9BVG3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.88■■□□□ 1.09
TRIM62Q9BVG3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM62Q9BVG3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.88■■□□□ 1.09
TRIM62Q9BVG3 LINC00565-201ENST00000562710 2331 ntBASIC21.88■■□□□ 1.09
TRIM62Q9BVG3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM62Q9BVG3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.88■■□□□ 1.09
TRIM62Q9BVG3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.88■■□□□ 1.09
TRIM62Q9BVG3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
TRIM62Q9BVG3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.88■■□□□ 1.09
TRIM62Q9BVG3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
TRIM62Q9BVG3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.88■■□□□ 1.09
TRIM62Q9BVG3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.88■■□□□ 1.09
TRIM62Q9BVG3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM62Q9BVG3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM62Q9BVG3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM62Q9BVG3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.88■■□□□ 1.09
TRIM62Q9BVG3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM62Q9BVG3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.87■■□□□ 1.09
TRIM62Q9BVG3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM62Q9BVG3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM62Q9BVG3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM62Q9BVG3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM62Q9BVG3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM62Q9BVG3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.87■■□□□ 1.09
TRIM62Q9BVG3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.87■■□□□ 1.09
TRIM62Q9BVG3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.87■■□□□ 1.09
TRIM62Q9BVG3 AC243732.1-201ENST00000612648 864 ntBASIC21.87■■□□□ 1.09
TRIM62Q9BVG3 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.87■■□□□ 1.09
TRIM62Q9BVG3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM62Q9BVG3 Z98882.1-201ENST00000622160 2253 ntBASIC21.87■■□□□ 1.09
TRIM62Q9BVG3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM62Q9BVG3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM62Q9BVG3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM62Q9BVG3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM62Q9BVG3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
TRIM62Q9BVG3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.87■■□□□ 1.09
TRIM62Q9BVG3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM62Q9BVG3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM62Q9BVG3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.87■■□□□ 1.09
TRIM62Q9BVG3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
TRIM62Q9BVG3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM62Q9BVG3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM62Q9BVG3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
TRIM62Q9BVG3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM62Q9BVG3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM62Q9BVG3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM62Q9BVG3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
TRIM62Q9BVG3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.86■■□□□ 1.09
TRIM62Q9BVG3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM62Q9BVG3 AC010536.3-201ENST00000620306 533 ntBASIC21.86■■□□□ 1.09
TRIM62Q9BVG3 AC092437.1-201ENST00000624794 1048 ntBASIC21.86■■□□□ 1.09
TRIM62Q9BVG3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.86■■□□□ 1.09
TRIM62Q9BVG3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM62Q9BVG3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM62Q9BVG3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM62Q9BVG3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM62Q9BVG3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM62Q9BVG3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.85■■□□□ 1.09
TRIM62Q9BVG3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM62Q9BVG3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM62Q9BVG3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.85■■□□□ 1.09
TRIM62Q9BVG3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM62Q9BVG3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.85■■□□□ 1.09
TRIM62Q9BVG3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM62Q9BVG3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.85■■□□□ 1.09
TRIM62Q9BVG3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.85■■□□□ 1.09
TRIM62Q9BVG3 MFSD11-216ENST00000590393 1141 ntBASIC21.85■■□□□ 1.09
TRIM62Q9BVG3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.85■■□□□ 1.09
TRIM62Q9BVG3 IKBKGP1-201ENST00000612193 1073 ntBASIC21.85■■□□□ 1.09
TRIM62Q9BVG3 AC011767.1-201ENST00000617410 1153 ntBASIC21.85■■□□□ 1.09
TRIM62Q9BVG3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
TRIM62Q9BVG3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM62Q9BVG3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.85■■□□□ 1.09
TRIM62Q9BVG3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
TRIM62Q9BVG3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM62Q9BVG3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.85■■□□□ 1.09
TRIM62Q9BVG3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM62Q9BVG3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
TRIM62Q9BVG3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM62Q9BVG3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM62Q9BVG3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.84■■□□□ 1.09
TRIM62Q9BVG3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms