Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRFN3Q9BTN0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRFN3Q9BTN0 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRFN3Q9BTN0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.25■□□□□ 0.99
LRFN3Q9BTN0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.25■□□□□ 0.99
LRFN3Q9BTN0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.25■□□□□ 0.99
LRFN3Q9BTN0 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC21.25■□□□□ 0.99
LRFN3Q9BTN0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRFN3Q9BTN0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.25■□□□□ 0.99
LRFN3Q9BTN0 AL358472.4-201ENST00000633140 710 ntBASIC21.25■□□□□ 0.99
LRFN3Q9BTN0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.25■□□□□ 0.99
LRFN3Q9BTN0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.25■□□□□ 0.99
LRFN3Q9BTN0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.25■□□□□ 0.99
LRFN3Q9BTN0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRFN3Q9BTN0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRFN3Q9BTN0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.25■□□□□ 0.99
LRFN3Q9BTN0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRFN3Q9BTN0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
LRFN3Q9BTN0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.24■□□□□ 0.99
LRFN3Q9BTN0 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.24■□□□□ 0.99
LRFN3Q9BTN0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRFN3Q9BTN0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.24■□□□□ 0.99
LRFN3Q9BTN0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.24■□□□□ 0.99
LRFN3Q9BTN0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.24■□□□□ 0.99
LRFN3Q9BTN0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRFN3Q9BTN0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.24■□□□□ 0.99
LRFN3Q9BTN0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.24■□□□□ 0.99
LRFN3Q9BTN0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.24■□□□□ 0.99
LRFN3Q9BTN0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRFN3Q9BTN0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
LRFN3Q9BTN0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.24■□□□□ 0.99
LRFN3Q9BTN0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRFN3Q9BTN0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRFN3Q9BTN0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRFN3Q9BTN0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.23■□□□□ 0.99
LRFN3Q9BTN0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRFN3Q9BTN0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRFN3Q9BTN0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
LRFN3Q9BTN0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
LRFN3Q9BTN0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
LRFN3Q9BTN0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.23■□□□□ 0.99
LRFN3Q9BTN0 FAM21FP-204ENST00000608637 956 ntBASIC21.23■□□□□ 0.99
LRFN3Q9BTN0 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRFN3Q9BTN0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LRFN3Q9BTN0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRFN3Q9BTN0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LRFN3Q9BTN0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.22■□□□□ 0.99
LRFN3Q9BTN0 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LRFN3Q9BTN0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.22■□□□□ 0.99
LRFN3Q9BTN0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.22■□□□□ 0.99
LRFN3Q9BTN0 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.22■□□□□ 0.99
LRFN3Q9BTN0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LRFN3Q9BTN0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.22■□□□□ 0.99
LRFN3Q9BTN0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LRFN3Q9BTN0 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRFN3Q9BTN0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
LRFN3Q9BTN0 AC079630.1-202ENST00000618127 1840 ntBASIC21.22■□□□□ 0.99
LRFN3Q9BTN0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
LRFN3Q9BTN0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRFN3Q9BTN0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRFN3Q9BTN0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRFN3Q9BTN0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
LRFN3Q9BTN0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.21■□□□□ 0.99
LRFN3Q9BTN0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.21■□□□□ 0.99
LRFN3Q9BTN0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRFN3Q9BTN0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRFN3Q9BTN0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRFN3Q9BTN0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRFN3Q9BTN0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.21■□□□□ 0.99
LRFN3Q9BTN0 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRFN3Q9BTN0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.21■□□□□ 0.99
LRFN3Q9BTN0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.21■□□□□ 0.99
LRFN3Q9BTN0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
LRFN3Q9BTN0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRFN3Q9BTN0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRFN3Q9BTN0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.2■□□□□ 0.98
LRFN3Q9BTN0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.2■□□□□ 0.98
LRFN3Q9BTN0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.2■□□□□ 0.98
LRFN3Q9BTN0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRFN3Q9BTN0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
LRFN3Q9BTN0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
LRFN3Q9BTN0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRFN3Q9BTN0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRFN3Q9BTN0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRFN3Q9BTN0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRFN3Q9BTN0 MCRIP2P1-201ENST00000394346 511 ntBASIC21.19■□□□□ 0.98
LRFN3Q9BTN0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.19■□□□□ 0.98
LRFN3Q9BTN0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
LRFN3Q9BTN0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.19■□□□□ 0.98
LRFN3Q9BTN0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.19■□□□□ 0.98
LRFN3Q9BTN0 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRFN3Q9BTN0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
LRFN3Q9BTN0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
LRFN3Q9BTN0 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.19■□□□□ 0.98
LRFN3Q9BTN0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.19■□□□□ 0.98
LRFN3Q9BTN0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.19■□□□□ 0.98
LRFN3Q9BTN0 KRT18P22-201ENST00000402024 1347 ntBASIC21.19■□□□□ 0.98
LRFN3Q9BTN0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
LRFN3Q9BTN0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRFN3Q9BTN0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms