Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TUBA1CQ9BQE3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TUBA1CQ9BQE3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.69■□□□□ 0.74
TUBA1CQ9BQE3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TUBA1CQ9BQE3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TUBA1CQ9BQE3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.69■□□□□ 0.74
TUBA1CQ9BQE3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TUBA1CQ9BQE3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TUBA1CQ9BQE3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TUBA1CQ9BQE3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TUBA1CQ9BQE3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.69■□□□□ 0.74
TUBA1CQ9BQE3 AC012414.1-201ENST00000556676 535 ntBASIC19.69■□□□□ 0.74
TUBA1CQ9BQE3 AL358852.1-201ENST00000623174 1268 ntBASIC19.69■□□□□ 0.74
TUBA1CQ9BQE3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.69■□□□□ 0.74
TUBA1CQ9BQE3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TUBA1CQ9BQE3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.69■□□□□ 0.74
TUBA1CQ9BQE3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TUBA1CQ9BQE3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.69■□□□□ 0.74
TUBA1CQ9BQE3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.69■□□□□ 0.74
TUBA1CQ9BQE3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TUBA1CQ9BQE3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
TUBA1CQ9BQE3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TUBA1CQ9BQE3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TUBA1CQ9BQE3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TUBA1CQ9BQE3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TUBA1CQ9BQE3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
TUBA1CQ9BQE3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.68■□□□□ 0.74
TUBA1CQ9BQE3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TUBA1CQ9BQE3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.68■□□□□ 0.74
TUBA1CQ9BQE3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.68■□□□□ 0.74
TUBA1CQ9BQE3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TUBA1CQ9BQE3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.68■□□□□ 0.74
TUBA1CQ9BQE3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TUBA1CQ9BQE3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.68■□□□□ 0.74
TUBA1CQ9BQE3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.68■□□□□ 0.74
TUBA1CQ9BQE3 MIR6084-201ENST00000622012 110 ntBASIC19.68■□□□□ 0.74
TUBA1CQ9BQE3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TUBA1CQ9BQE3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.68■□□□□ 0.74
TUBA1CQ9BQE3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TUBA1CQ9BQE3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
TUBA1CQ9BQE3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TUBA1CQ9BQE3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TUBA1CQ9BQE3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TUBA1CQ9BQE3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TUBA1CQ9BQE3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TUBA1CQ9BQE3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TUBA1CQ9BQE3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TUBA1CQ9BQE3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TUBA1CQ9BQE3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TUBA1CQ9BQE3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.67■□□□□ 0.74
TUBA1CQ9BQE3 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.67■□□□□ 0.74
TUBA1CQ9BQE3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TUBA1CQ9BQE3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TUBA1CQ9BQE3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TUBA1CQ9BQE3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TUBA1CQ9BQE3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TUBA1CQ9BQE3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TUBA1CQ9BQE3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TUBA1CQ9BQE3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TUBA1CQ9BQE3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
TUBA1CQ9BQE3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TUBA1CQ9BQE3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TUBA1CQ9BQE3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.66■□□□□ 0.74
TUBA1CQ9BQE3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TUBA1CQ9BQE3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.66■□□□□ 0.74
TUBA1CQ9BQE3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.66■□□□□ 0.74
TUBA1CQ9BQE3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.66■□□□□ 0.74
TUBA1CQ9BQE3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TUBA1CQ9BQE3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.66■□□□□ 0.74
TUBA1CQ9BQE3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
TUBA1CQ9BQE3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TUBA1CQ9BQE3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TUBA1CQ9BQE3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.66■□□□□ 0.74
TUBA1CQ9BQE3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TUBA1CQ9BQE3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.66■□□□□ 0.74
TUBA1CQ9BQE3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.66■□□□□ 0.74
TUBA1CQ9BQE3 AL354811.1-201ENST00000610286 706 ntBASIC19.66■□□□□ 0.74
TUBA1CQ9BQE3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TUBA1CQ9BQE3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TUBA1CQ9BQE3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.66■□□□□ 0.74
TUBA1CQ9BQE3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TUBA1CQ9BQE3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TUBA1CQ9BQE3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TUBA1CQ9BQE3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TUBA1CQ9BQE3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TUBA1CQ9BQE3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TUBA1CQ9BQE3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TUBA1CQ9BQE3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TUBA1CQ9BQE3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TUBA1CQ9BQE3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TUBA1CQ9BQE3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TUBA1CQ9BQE3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TUBA1CQ9BQE3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.65■□□□□ 0.74
TUBA1CQ9BQE3 YBX1P1-201ENST00000445822 960 ntBASIC19.65■□□□□ 0.74
TUBA1CQ9BQE3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TUBA1CQ9BQE3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TUBA1CQ9BQE3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TUBA1CQ9BQE3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TUBA1CQ9BQE3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TUBA1CQ9BQE3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms