Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LITAFQ99732 AC003102.1-202ENST00000563394 1796 ntBASIC13.99□□□□□ -0.17
LITAFQ99732 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC13.98□□□□□ -0.17
LITAFQ99732 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LITAFQ99732 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LITAFQ99732 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LITAFQ99732 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LITAFQ99732 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LITAFQ99732 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LITAFQ99732 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LITAFQ99732 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC13.98□□□□□ -0.17
LITAFQ99732 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LITAFQ99732 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LITAFQ99732 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LITAFQ99732 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LITAFQ99732 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC13.98□□□□□ -0.17
LITAFQ99732 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LITAFQ99732 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LITAFQ99732 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LITAFQ99732 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LITAFQ99732 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
LITAFQ99732 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LITAFQ99732 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC13.98□□□□□ -0.17
LITAFQ99732 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LITAFQ99732 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC13.98□□□□□ -0.17
LITAFQ99732 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
LITAFQ99732 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LITAFQ99732 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC13.98□□□□□ -0.17
LITAFQ99732 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LITAFQ99732 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LITAFQ99732 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LITAFQ99732 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LITAFQ99732 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LITAFQ99732 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC13.98□□□□□ -0.17
LITAFQ99732 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC13.97□□□□□ -0.17
LITAFQ99732 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LITAFQ99732 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LITAFQ99732 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LITAFQ99732 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LITAFQ99732 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC13.97□□□□□ -0.17
LITAFQ99732 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC13.97□□□□□ -0.17
LITAFQ99732 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC13.97□□□□□ -0.17
LITAFQ99732 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LITAFQ99732 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LITAFQ99732 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC13.97□□□□□ -0.17
LITAFQ99732 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LITAFQ99732 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LITAFQ99732 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LITAFQ99732 RPS2-202ENST00000526522 924 ntTSL 2 BASIC13.97□□□□□ -0.17
LITAFQ99732 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LITAFQ99732 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LITAFQ99732 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LITAFQ99732 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LITAFQ99732 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
LITAFQ99732 AC121338.2-201ENST00000622535 1744 ntBASIC13.97□□□□□ -0.17
LITAFQ99732 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LITAFQ99732 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LITAFQ99732 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LITAFQ99732 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LITAFQ99732 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LITAFQ99732 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LITAFQ99732 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LITAFQ99732 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LITAFQ99732 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13.97□□□□□ -0.17
LITAFQ99732 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LITAFQ99732 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
LITAFQ99732 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LITAFQ99732 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LITAFQ99732 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LITAFQ99732 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LITAFQ99732 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LITAFQ99732 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC13.96□□□□□ -0.17
LITAFQ99732 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LITAFQ99732 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LITAFQ99732 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC13.96□□□□□ -0.17
LITAFQ99732 AC004408.2-201ENST00000623613 2777 ntBASIC13.96□□□□□ -0.17
LITAFQ99732 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LITAFQ99732 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LITAFQ99732 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LITAFQ99732 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC13.96□□□□□ -0.17
LITAFQ99732 AC129492.7-201ENST00000622992 756 ntBASIC13.96□□□□□ -0.17
LITAFQ99732 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LITAFQ99732 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC13.96□□□□□ -0.17
LITAFQ99732 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
LITAFQ99732 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LITAFQ99732 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC13.96□□□□□ -0.18
LITAFQ99732 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LITAFQ99732 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LITAFQ99732 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LITAFQ99732 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC13.95□□□□□ -0.18
LITAFQ99732 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC13.95□□□□□ -0.18
LITAFQ99732 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LITAFQ99732 HYI-213ENST00000583037 1322 ntTSL 5 BASIC13.95□□□□□ -0.18
LITAFQ99732 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LITAFQ99732 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LITAFQ99732 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LITAFQ99732 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LITAFQ99732 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC13.95□□□□□ -0.18
LITAFQ99732 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC13.95□□□□□ -0.18
LITAFQ99732 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms