Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC38A3Q99624 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC38A3Q99624 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC38A3Q99624 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC38A3Q99624 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC38A3Q99624 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC38A3Q99624 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC38A3Q99624 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.34■□□□□ 0.85
SLC38A3Q99624 AL138781.1-201ENST00000566567 1274 ntBASIC20.34■□□□□ 0.85
SLC38A3Q99624 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC38A3Q99624 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.34■□□□□ 0.85
SLC38A3Q99624 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC38A3Q99624 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC38A3Q99624 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC38A3Q99624 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC38A3Q99624 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC38A3Q99624 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC38A3Q99624 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC38A3Q99624 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC38A3Q99624 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLC38A3Q99624 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLC38A3Q99624 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLC38A3Q99624 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC38A3Q99624 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLC38A3Q99624 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC38A3Q99624 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.33■□□□□ 0.85
SLC38A3Q99624 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.33■□□□□ 0.85
SLC38A3Q99624 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC38A3Q99624 OR10C1-204ENST00000622521 1039 ntBASIC20.33■□□□□ 0.85
SLC38A3Q99624 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC38A3Q99624 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC38A3Q99624 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
SLC38A3Q99624 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.33■□□□□ 0.84
SLC38A3Q99624 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.33■□□□□ 0.84
SLC38A3Q99624 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC38A3Q99624 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC38A3Q99624 AC242852.2-201ENST00000615738 1807 ntBASIC20.32■□□□□ 0.84
SLC38A3Q99624 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.32■□□□□ 0.84
SLC38A3Q99624 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC38A3Q99624 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SLC38A3Q99624 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
SLC38A3Q99624 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC38A3Q99624 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC38A3Q99624 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
SLC38A3Q99624 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC38A3Q99624 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
SLC38A3Q99624 AL591742.1-201ENST00000604433 565 ntBASIC20.32■□□□□ 0.84
SLC38A3Q99624 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC38A3Q99624 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC38A3Q99624 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC38A3Q99624 MKRN4P-201ENST00000444706 1521 ntBASIC20.32■□□□□ 0.84
SLC38A3Q99624 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.32■□□□□ 0.84
SLC38A3Q99624 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC38A3Q99624 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC38A3Q99624 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC38A3Q99624 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC38A3Q99624 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.31■□□□□ 0.84
SLC38A3Q99624 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.31■□□□□ 0.84
SLC38A3Q99624 AC243732.1-201ENST00000612648 864 ntBASIC20.31■□□□□ 0.84
SLC38A3Q99624 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.31■□□□□ 0.84
SLC38A3Q99624 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC38A3Q99624 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC38A3Q99624 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.31■□□□□ 0.84
SLC38A3Q99624 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.31■□□□□ 0.84
SLC38A3Q99624 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC38A3Q99624 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC38A3Q99624 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC38A3Q99624 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC38A3Q99624 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC38A3Q99624 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC38A3Q99624 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC38A3Q99624 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC38A3Q99624 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SLC38A3Q99624 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC38A3Q99624 AC016405.3-201ENST00000607710 860 ntBASIC20.3■□□□□ 0.84
SLC38A3Q99624 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC38A3Q99624 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SLC38A3Q99624 AC133041.1-202ENST00000642053 222 ntBASIC20.3■□□□□ 0.84
SLC38A3Q99624 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC38A3Q99624 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC38A3Q99624 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC38A3Q99624 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC38A3Q99624 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC38A3Q99624 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC38A3Q99624 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
SLC38A3Q99624 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC38A3Q99624 AC233723.2-201ENST00000623798 2106 ntBASIC20.29■□□□□ 0.84
SLC38A3Q99624 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC38A3Q99624 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC38A3Q99624 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC38A3Q99624 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC38A3Q99624 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC38A3Q99624 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC38A3Q99624 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC38A3Q99624 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC38A3Q99624 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC38A3Q99624 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC38A3Q99624 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SLC38A3Q99624 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC38A3Q99624 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms