Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHB18PQ96TA0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDHB18PQ96TA0 AL157384.1-201ENST00000445995 2473 ntBASIC22.25■■□□□ 1.15
PCDHB18PQ96TA0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB18PQ96TA0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDHB18PQ96TA0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB18PQ96TA0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB18PQ96TA0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB18PQ96TA0 AC079140.4-201ENST00000507448 529 ntBASIC22.25■■□□□ 1.15
PCDHB18PQ96TA0 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDHB18PQ96TA0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB18PQ96TA0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDHB18PQ96TA0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.25■■□□□ 1.15
PCDHB18PQ96TA0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB18PQ96TA0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
PCDHB18PQ96TA0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB18PQ96TA0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
PCDHB18PQ96TA0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB18PQ96TA0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB18PQ96TA0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
PCDHB18PQ96TA0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB18PQ96TA0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB18PQ96TA0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHB18PQ96TA0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB18PQ96TA0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
PCDHB18PQ96TA0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB18PQ96TA0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB18PQ96TA0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.24■■□□□ 1.15
PCDHB18PQ96TA0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB18PQ96TA0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB18PQ96TA0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB18PQ96TA0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB18PQ96TA0 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHB18PQ96TA0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB18PQ96TA0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHB18PQ96TA0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
PCDHB18PQ96TA0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC22.23■■□□□ 1.15
PCDHB18PQ96TA0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC22.23■■□□□ 1.15
PCDHB18PQ96TA0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHB18PQ96TA0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.23■■□□□ 1.15
PCDHB18PQ96TA0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.23■■□□□ 1.15
PCDHB18PQ96TA0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHB18PQ96TA0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
PCDHB18PQ96TA0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHB18PQ96TA0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHB18PQ96TA0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHB18PQ96TA0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHB18PQ96TA0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB18PQ96TA0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB18PQ96TA0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.22■■□□□ 1.15
PCDHB18PQ96TA0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB18PQ96TA0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
PCDHB18PQ96TA0 LINC02228-203ENST00000641970 1355 ntBASIC22.22■■□□□ 1.15
PCDHB18PQ96TA0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
PCDHB18PQ96TA0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB18PQ96TA0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB18PQ96TA0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB18PQ96TA0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB18PQ96TA0 KRT87P-202ENST00000534226 1464 ntBASIC22.22■■□□□ 1.15
PCDHB18PQ96TA0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHB18PQ96TA0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHB18PQ96TA0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHB18PQ96TA0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHB18PQ96TA0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
PCDHB18PQ96TA0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
PCDHB18PQ96TA0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHB18PQ96TA0 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.21■■□□□ 1.15
PCDHB18PQ96TA0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHB18PQ96TA0 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHB18PQ96TA0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHB18PQ96TA0 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.21■■□□□ 1.15
PCDHB18PQ96TA0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.21■■□□□ 1.15
PCDHB18PQ96TA0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
PCDHB18PQ96TA0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHB18PQ96TA0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHB18PQ96TA0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHB18PQ96TA0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
PCDHB18PQ96TA0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.15
PCDHB18PQ96TA0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
PCDHB18PQ96TA0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
PCDHB18PQ96TA0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC22.2■■□□□ 1.14
PCDHB18PQ96TA0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHB18PQ96TA0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHB18PQ96TA0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHB18PQ96TA0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.2■■□□□ 1.14
PCDHB18PQ96TA0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
PCDHB18PQ96TA0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHB18PQ96TA0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.2■■□□□ 1.14
PCDHB18PQ96TA0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHB18PQ96TA0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHB18PQ96TA0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHB18PQ96TA0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHB18PQ96TA0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHB18PQ96TA0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
PCDHB18PQ96TA0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHB18PQ96TA0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDHB18PQ96TA0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHB18PQ96TA0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDHB18PQ96TA0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDHB18PQ96TA0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms