Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19■□□□□ 0.63
SNX18Q96RF0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19■□□□□ 0.63
SNX18Q96RF0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19■□□□□ 0.63
SNX18Q96RF0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19■□□□□ 0.63
SNX18Q96RF0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19■□□□□ 0.63
SNX18Q96RF0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19■□□□□ 0.63
SNX18Q96RF0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19■□□□□ 0.63
SNX18Q96RF0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19■□□□□ 0.63
SNX18Q96RF0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNX18Q96RF0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SNX18Q96RF0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX18Q96RF0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SNX18Q96RF0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SNX18Q96RF0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNX18Q96RF0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX18Q96RF0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
SNX18Q96RF0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNX18Q96RF0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SNX18Q96RF0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX18Q96RF0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.99■□□□□ 0.63
SNX18Q96RF0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX18Q96RF0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SNX18Q96RF0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
SNX18Q96RF0 MIR4767-201ENST00000582827 78 ntBASIC18.99■□□□□ 0.63
SNX18Q96RF0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.99■□□□□ 0.63
SNX18Q96RF0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.99■□□□□ 0.63
SNX18Q96RF0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.99■□□□□ 0.63
SNX18Q96RF0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SNX18Q96RF0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
SNX18Q96RF0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX18Q96RF0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SNX18Q96RF0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.99■□□□□ 0.63
SNX18Q96RF0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
SNX18Q96RF0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.99■□□□□ 0.63
SNX18Q96RF0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.99■□□□□ 0.63
SNX18Q96RF0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNX18Q96RF0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNX18Q96RF0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.98■□□□□ 0.63
SNX18Q96RF0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.98■□□□□ 0.63
SNX18Q96RF0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNX18Q96RF0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.98■□□□□ 0.63
SNX18Q96RF0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNX18Q96RF0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNX18Q96RF0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNX18Q96RF0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNX18Q96RF0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNX18Q96RF0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNX18Q96RF0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNX18Q96RF0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNX18Q96RF0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNX18Q96RF0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNX18Q96RF0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SNX18Q96RF0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.97■□□□□ 0.63
SNX18Q96RF0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNX18Q96RF0 FEM1AP4-201ENST00000443167 1987 ntBASIC18.97■□□□□ 0.63
SNX18Q96RF0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.97■□□□□ 0.63
SNX18Q96RF0 AP006587.3-201ENST00000525742 1516 ntBASIC18.97■□□□□ 0.63
SNX18Q96RF0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.97■□□□□ 0.63
SNX18Q96RF0 AC105265.2-201ENST00000467189 838 ntBASIC18.97■□□□□ 0.63
SNX18Q96RF0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.97■□□□□ 0.63
SNX18Q96RF0 AP001330.3-201ENST00000520123 633 ntBASIC18.97■□□□□ 0.63
SNX18Q96RF0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SNX18Q96RF0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SNX18Q96RF0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SNX18Q96RF0 AC233992.3-201ENST00000607491 485 ntBASIC18.97■□□□□ 0.63
SNX18Q96RF0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SNX18Q96RF0 AL020996.1-203ENST00000536896 2307 ntBASIC18.97■□□□□ 0.63
SNX18Q96RF0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNX18Q96RF0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNX18Q96RF0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SNX18Q96RF0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNX18Q96RF0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SNX18Q96RF0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNX18Q96RF0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNX18Q96RF0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNX18Q96RF0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.96■□□□□ 0.63
SNX18Q96RF0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SNX18Q96RF0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
SNX18Q96RF0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.96■□□□□ 0.63
SNX18Q96RF0 SMUG1P1-201ENST00000590640 811 ntBASIC18.96■□□□□ 0.63
SNX18Q96RF0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SNX18Q96RF0 AL136967.2-201ENST00000623968 743 ntBASIC18.96■□□□□ 0.63
SNX18Q96RF0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SNX18Q96RF0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNX18Q96RF0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SNX18Q96RF0 AC003102.1-202ENST00000563394 1796 ntBASIC18.96■□□□□ 0.63
SNX18Q96RF0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.96■□□□□ 0.63
SNX18Q96RF0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNX18Q96RF0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SNX18Q96RF0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNX18Q96RF0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNX18Q96RF0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.95■□□□□ 0.62
SNX18Q96RF0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SNX18Q96RF0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNX18Q96RF0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.95■□□□□ 0.62
SNX18Q96RF0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNX18Q96RF0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.95■□□□□ 0.62
SNX18Q96RF0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
SNX18Q96RF0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNX18Q96RF0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms