Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NECTIN4Q96NY8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
NECTIN4Q96NY8 AC137767.1-201ENST00000602918 1920 ntBASIC21.84■■□□□ 1.09
NECTIN4Q96NY8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.84■■□□□ 1.09
NECTIN4Q96NY8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NECTIN4Q96NY8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.84■■□□□ 1.09
NECTIN4Q96NY8 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NECTIN4Q96NY8 AC092368.3-202ENST00000574180 1591 ntBASIC21.83■■□□□ 1.09
NECTIN4Q96NY8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.83■■□□□ 1.09
NECTIN4Q96NY8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NECTIN4Q96NY8 FAM210CP-201ENST00000445714 574 ntBASIC21.83■■□□□ 1.09
NECTIN4Q96NY8 AC245052.3-201ENST00000450182 901 ntBASIC21.83■■□□□ 1.09
NECTIN4Q96NY8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.83■■□□□ 1.09
NECTIN4Q96NY8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NECTIN4Q96NY8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NECTIN4Q96NY8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NECTIN4Q96NY8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
NECTIN4Q96NY8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
NECTIN4Q96NY8 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.82■■□□□ 1.08
NECTIN4Q96NY8 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
NECTIN4Q96NY8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NECTIN4Q96NY8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NECTIN4Q96NY8 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
NECTIN4Q96NY8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
NECTIN4Q96NY8 ECEL1P3-201ENST00000427961 737 ntBASIC21.82■■□□□ 1.08
NECTIN4Q96NY8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.82■■□□□ 1.08
NECTIN4Q96NY8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.82■■□□□ 1.08
NECTIN4Q96NY8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
NECTIN4Q96NY8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.82■■□□□ 1.08
NECTIN4Q96NY8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.82■■□□□ 1.08
NECTIN4Q96NY8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.82■■□□□ 1.08
NECTIN4Q96NY8 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.82■■□□□ 1.08
NECTIN4Q96NY8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.82■■□□□ 1.08
NECTIN4Q96NY8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
NECTIN4Q96NY8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
NECTIN4Q96NY8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NECTIN4Q96NY8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NECTIN4Q96NY8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NECTIN4Q96NY8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.81■■□□□ 1.08
NECTIN4Q96NY8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.81■■□□□ 1.08
NECTIN4Q96NY8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.81■■□□□ 1.08
NECTIN4Q96NY8 Z99916.2-201ENST00000604037 246 ntBASIC21.81■■□□□ 1.08
NECTIN4Q96NY8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
NECTIN4Q96NY8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
NECTIN4Q96NY8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NECTIN4Q96NY8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.8■■□□□ 1.08
NECTIN4Q96NY8 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NECTIN4Q96NY8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NECTIN4Q96NY8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NECTIN4Q96NY8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NECTIN4Q96NY8 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
NECTIN4Q96NY8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.8■■□□□ 1.08
NECTIN4Q96NY8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.8■■□□□ 1.08
NECTIN4Q96NY8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NECTIN4Q96NY8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NECTIN4Q96NY8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.8■■□□□ 1.08
NECTIN4Q96NY8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
NECTIN4Q96NY8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.8■■□□□ 1.08
NECTIN4Q96NY8 REXO1L12P-201ENST00000622156 912 ntBASIC21.8■■□□□ 1.08
NECTIN4Q96NY8 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NECTIN4Q96NY8 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NECTIN4Q96NY8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
NECTIN4Q96NY8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.8■■□□□ 1.08
NECTIN4Q96NY8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.79■■□□□ 1.08
NECTIN4Q96NY8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
NECTIN4Q96NY8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NECTIN4Q96NY8 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.79■■□□□ 1.08
NECTIN4Q96NY8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NECTIN4Q96NY8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NECTIN4Q96NY8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NECTIN4Q96NY8 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NECTIN4Q96NY8 MIR1224-201ENST00000408193 85 ntBASIC21.79■■□□□ 1.08
NECTIN4Q96NY8 SNORA78-201ENST00000459373 127 ntBASIC21.79■■□□□ 1.08
NECTIN4Q96NY8 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.79■■□□□ 1.08
NECTIN4Q96NY8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NECTIN4Q96NY8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.79■■□□□ 1.08
NECTIN4Q96NY8 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.79■■□□□ 1.08
NECTIN4Q96NY8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.79■■□□□ 1.08
NECTIN4Q96NY8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.79■■□□□ 1.08
NECTIN4Q96NY8 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.79■■□□□ 1.08
NECTIN4Q96NY8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NECTIN4Q96NY8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
NECTIN4Q96NY8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NECTIN4Q96NY8 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
NECTIN4Q96NY8 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NECTIN4Q96NY8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NECTIN4Q96NY8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
NECTIN4Q96NY8 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.78■■□□□ 1.08
NECTIN4Q96NY8 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.78■■□□□ 1.08
NECTIN4Q96NY8 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
NECTIN4Q96NY8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.78■■□□□ 1.08
NECTIN4Q96NY8 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.78■■□□□ 1.08
NECTIN4Q96NY8 LINC01023-201ENST00000606054 436 ntBASIC21.78■■□□□ 1.08
NECTIN4Q96NY8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.78■■□□□ 1.08
NECTIN4Q96NY8 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NECTIN4Q96NY8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.78■■□□□ 1.08
NECTIN4Q96NY8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NECTIN4Q96NY8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NECTIN4Q96NY8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NECTIN4Q96NY8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms