Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CTHRC1Q96CG8 AC005229.4-201ENST00000610085 2198 ntBASIC19.51■□□□□ 0.71
CTHRC1Q96CG8 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
CTHRC1Q96CG8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTHRC1Q96CG8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.51■□□□□ 0.71
CTHRC1Q96CG8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTHRC1Q96CG8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTHRC1Q96CG8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.5■□□□□ 0.71
CTHRC1Q96CG8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTHRC1Q96CG8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CTHRC1Q96CG8 AL137060.1-201ENST00000618151 2648 ntBASIC19.5■□□□□ 0.71
CTHRC1Q96CG8 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTHRC1Q96CG8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTHRC1Q96CG8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTHRC1Q96CG8 SLC7A5P2-201ENST00000553010 536 ntBASIC19.5■□□□□ 0.71
CTHRC1Q96CG8 AC120498.10-201ENST00000621827 505 ntBASIC19.5■□□□□ 0.71
CTHRC1Q96CG8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTHRC1Q96CG8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.5■□□□□ 0.71
CTHRC1Q96CG8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CTHRC1Q96CG8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.5■□□□□ 0.71
CTHRC1Q96CG8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.5■□□□□ 0.71
CTHRC1Q96CG8 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CTHRC1Q96CG8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTHRC1Q96CG8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTHRC1Q96CG8 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTHRC1Q96CG8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTHRC1Q96CG8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTHRC1Q96CG8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTHRC1Q96CG8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTHRC1Q96CG8 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTHRC1Q96CG8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.49■□□□□ 0.71
CTHRC1Q96CG8 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
CTHRC1Q96CG8 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTHRC1Q96CG8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTHRC1Q96CG8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTHRC1Q96CG8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTHRC1Q96CG8 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTHRC1Q96CG8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTHRC1Q96CG8 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CTHRC1Q96CG8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CTHRC1Q96CG8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.48■□□□□ 0.71
CTHRC1Q96CG8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.48■□□□□ 0.71
CTHRC1Q96CG8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTHRC1Q96CG8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CTHRC1Q96CG8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTHRC1Q96CG8 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.48■□□□□ 0.71
CTHRC1Q96CG8 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CTHRC1Q96CG8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.48■□□□□ 0.71
CTHRC1Q96CG8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTHRC1Q96CG8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CTHRC1Q96CG8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.48■□□□□ 0.71
CTHRC1Q96CG8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTHRC1Q96CG8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTHRC1Q96CG8 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTHRC1Q96CG8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.47■□□□□ 0.71
CTHRC1Q96CG8 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTHRC1Q96CG8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTHRC1Q96CG8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTHRC1Q96CG8 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CTHRC1Q96CG8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.47■□□□□ 0.71
CTHRC1Q96CG8 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
CTHRC1Q96CG8 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTHRC1Q96CG8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.47■□□□□ 0.71
CTHRC1Q96CG8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.47■□□□□ 0.71
CTHRC1Q96CG8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CTHRC1Q96CG8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CTHRC1Q96CG8 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.47■□□□□ 0.71
CTHRC1Q96CG8 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.47■□□□□ 0.71
CTHRC1Q96CG8 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CTHRC1Q96CG8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.47■□□□□ 0.71
CTHRC1Q96CG8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CTHRC1Q96CG8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
CTHRC1Q96CG8 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.47■□□□□ 0.71
CTHRC1Q96CG8 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTHRC1Q96CG8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.46■□□□□ 0.71
CTHRC1Q96CG8 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTHRC1Q96CG8 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.46■□□□□ 0.71
CTHRC1Q96CG8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.46■□□□□ 0.71
CTHRC1Q96CG8 AC092666.2-201ENST00000613287 246 ntBASIC19.46■□□□□ 0.71
CTHRC1Q96CG8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTHRC1Q96CG8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTHRC1Q96CG8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.46■□□□□ 0.71
CTHRC1Q96CG8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTHRC1Q96CG8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTHRC1Q96CG8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.45■□□□□ 0.7
CTHRC1Q96CG8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.45■□□□□ 0.7
CTHRC1Q96CG8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTHRC1Q96CG8 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTHRC1Q96CG8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTHRC1Q96CG8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CTHRC1Q96CG8 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.45■□□□□ 0.7
CTHRC1Q96CG8 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTHRC1Q96CG8 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTHRC1Q96CG8 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.45■□□□□ 0.7
CTHRC1Q96CG8 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.45■□□□□ 0.7
CTHRC1Q96CG8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.45■□□□□ 0.7
CTHRC1Q96CG8 RARRES2P11-201ENST00000635158 484 ntBASIC19.45■□□□□ 0.7
CTHRC1Q96CG8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.45■□□□□ 0.7
CTHRC1Q96CG8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTHRC1Q96CG8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms