Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HMGB4Q8WW32 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HMGB4Q8WW32 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
HMGB4Q8WW32 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HMGB4Q8WW32 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.07■□□□□ 0.96
HMGB4Q8WW32 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
HMGB4Q8WW32 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HMGB4Q8WW32 AC092053.2-201ENST00000640557 1818 ntBASIC21.07■□□□□ 0.96
HMGB4Q8WW32 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HMGB4Q8WW32 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.07■□□□□ 0.96
HMGB4Q8WW32 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HMGB4Q8WW32 AL355472.2-201ENST00000422958 438 ntBASIC21.07■□□□□ 0.96
HMGB4Q8WW32 GCSHP5-201ENST00000443090 522 ntBASIC21.07■□□□□ 0.96
HMGB4Q8WW32 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.07■□□□□ 0.96
HMGB4Q8WW32 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.07■□□□□ 0.96
HMGB4Q8WW32 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HMGB4Q8WW32 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.07■□□□□ 0.96
HMGB4Q8WW32 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HMGB4Q8WW32 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.07■□□□□ 0.96
HMGB4Q8WW32 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.07■□□□□ 0.96
HMGB4Q8WW32 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HMGB4Q8WW32 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
HMGB4Q8WW32 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HMGB4Q8WW32 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HMGB4Q8WW32 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.06■□□□□ 0.96
HMGB4Q8WW32 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.06■□□□□ 0.96
HMGB4Q8WW32 AC128676.1-201ENST00000454392 318 ntBASIC21.06■□□□□ 0.96
HMGB4Q8WW32 AP006294.2-201ENST00000641667 209 ntBASIC21.06■□□□□ 0.96
HMGB4Q8WW32 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
HMGB4Q8WW32 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
HMGB4Q8WW32 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGB4Q8WW32 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGB4Q8WW32 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HMGB4Q8WW32 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
HMGB4Q8WW32 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.05■□□□□ 0.96
HMGB4Q8WW32 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.05■□□□□ 0.96
HMGB4Q8WW32 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGB4Q8WW32 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGB4Q8WW32 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HMGB4Q8WW32 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
HMGB4Q8WW32 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
HMGB4Q8WW32 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGB4Q8WW32 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HMGB4Q8WW32 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGB4Q8WW32 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
HMGB4Q8WW32 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
HMGB4Q8WW32 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.05■□□□□ 0.96
HMGB4Q8WW32 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGB4Q8WW32 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HMGB4Q8WW32 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.05■□□□□ 0.96
HMGB4Q8WW32 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.05■□□□□ 0.96
HMGB4Q8WW32 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGB4Q8WW32 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
HMGB4Q8WW32 KRT17P1-201ENST00000399211 1546 ntBASIC21.04■□□□□ 0.96
HMGB4Q8WW32 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGB4Q8WW32 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
HMGB4Q8WW32 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGB4Q8WW32 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGB4Q8WW32 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
HMGB4Q8WW32 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
HMGB4Q8WW32 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGB4Q8WW32 AC245052.3-201ENST00000450182 901 ntBASIC21.04■□□□□ 0.96
HMGB4Q8WW32 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.04■□□□□ 0.96
HMGB4Q8WW32 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.04■□□□□ 0.96
HMGB4Q8WW32 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.04■□□□□ 0.96
HMGB4Q8WW32 AC142381.4-202ENST00000563973 229 ntBASIC21.04■□□□□ 0.96
HMGB4Q8WW32 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
HMGB4Q8WW32 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGB4Q8WW32 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.04■□□□□ 0.96
HMGB4Q8WW32 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
HMGB4Q8WW32 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.04■□□□□ 0.96
HMGB4Q8WW32 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.03■□□□□ 0.96
HMGB4Q8WW32 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMGB4Q8WW32 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.03■□□□□ 0.96
HMGB4Q8WW32 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMGB4Q8WW32 AC091799.1-201ENST00000422823 811 ntBASIC21.03■□□□□ 0.96
HMGB4Q8WW32 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
HMGB4Q8WW32 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.03■□□□□ 0.96
HMGB4Q8WW32 UNC93B5-201ENST00000530315 699 ntBASIC21.03■□□□□ 0.96
HMGB4Q8WW32 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
HMGB4Q8WW32 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HMGB4Q8WW32 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.03■□□□□ 0.96
HMGB4Q8WW32 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
HMGB4Q8WW32 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HMGB4Q8WW32 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HMGB4Q8WW32 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HMGB4Q8WW32 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HMGB4Q8WW32 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HMGB4Q8WW32 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HMGB4Q8WW32 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HMGB4Q8WW32 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.02■□□□□ 0.96
HMGB4Q8WW32 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.02■□□□□ 0.96
HMGB4Q8WW32 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.02■□□□□ 0.96
HMGB4Q8WW32 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.02■□□□□ 0.96
HMGB4Q8WW32 CDV3P1-201ENST00000471403 739 ntBASIC21.02■□□□□ 0.96
HMGB4Q8WW32 AC026366.1-201ENST00000488803 879 ntBASIC21.02■□□□□ 0.96
HMGB4Q8WW32 AP003097.1-201ENST00000530657 1135 ntBASIC21.02■□□□□ 0.96
HMGB4Q8WW32 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.02■□□□□ 0.96
HMGB4Q8WW32 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.02■□□□□ 0.96
HMGB4Q8WW32 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms