Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF138Q8WVD3 AC004911.1-201ENST00000416316 871 ntBASIC19.09■□□□□ 0.65
RNF138Q8WVD3 CNN2P6-201ENST00000439038 900 ntBASIC19.09■□□□□ 0.65
RNF138Q8WVD3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.09■□□□□ 0.65
RNF138Q8WVD3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF138Q8WVD3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
RNF138Q8WVD3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF138Q8WVD3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF138Q8WVD3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF138Q8WVD3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF138Q8WVD3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
RNF138Q8WVD3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF138Q8WVD3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNF138Q8WVD3 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
RNF138Q8WVD3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.08■□□□□ 0.64
RNF138Q8WVD3 TERF1P5-201ENST00000477545 1207 ntBASIC19.08■□□□□ 0.64
RNF138Q8WVD3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.08■□□□□ 0.64
RNF138Q8WVD3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
RNF138Q8WVD3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.08■□□□□ 0.64
RNF138Q8WVD3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF138Q8WVD3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
RNF138Q8WVD3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.08■□□□□ 0.64
RNF138Q8WVD3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RNF138Q8WVD3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF138Q8WVD3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF138Q8WVD3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
RNF138Q8WVD3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF138Q8WVD3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF138Q8WVD3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
RNF138Q8WVD3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF138Q8WVD3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF138Q8WVD3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF138Q8WVD3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
RNF138Q8WVD3 AC080038.1-201ENST00000611274 1154 ntBASIC19.07■□□□□ 0.64
RNF138Q8WVD3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
RNF138Q8WVD3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RNF138Q8WVD3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF138Q8WVD3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF138Q8WVD3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF138Q8WVD3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF138Q8WVD3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RNF138Q8WVD3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF138Q8WVD3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF138Q8WVD3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF138Q8WVD3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF138Q8WVD3 CDCA4P2-201ENST00000441182 718 ntBASIC19.06■□□□□ 0.64
RNF138Q8WVD3 AC245052.3-201ENST00000450182 901 ntBASIC19.06■□□□□ 0.64
RNF138Q8WVD3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF138Q8WVD3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RNF138Q8WVD3 AC073111.5-205ENST00000641717 521 ntBASIC19.06■□□□□ 0.64
RNF138Q8WVD3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF138Q8WVD3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF138Q8WVD3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF138Q8WVD3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF138Q8WVD3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF138Q8WVD3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF138Q8WVD3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF138Q8WVD3 AC091799.1-201ENST00000422823 811 ntBASIC19.05■□□□□ 0.64
RNF138Q8WVD3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF138Q8WVD3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF138Q8WVD3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF138Q8WVD3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF138Q8WVD3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RNF138Q8WVD3 AC013268.1-206ENST00000638368 961 ntBASIC19.05■□□□□ 0.64
RNF138Q8WVD3 AC112229.1-201ENST00000639295 961 ntBASIC19.05■□□□□ 0.64
RNF138Q8WVD3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF138Q8WVD3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RNF138Q8WVD3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF138Q8WVD3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF138Q8WVD3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF138Q8WVD3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF138Q8WVD3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF138Q8WVD3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF138Q8WVD3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RNF138Q8WVD3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RNF138Q8WVD3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
RNF138Q8WVD3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RNF138Q8WVD3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF138Q8WVD3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RNF138Q8WVD3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF138Q8WVD3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF138Q8WVD3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF138Q8WVD3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF138Q8WVD3 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF138Q8WVD3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF138Q8WVD3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF138Q8WVD3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF138Q8WVD3 FEM1AP4-201ENST00000443167 1987 ntBASIC19.04■□□□□ 0.64
RNF138Q8WVD3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF138Q8WVD3 AC026310.3-201ENST00000625186 2373 ntBASIC19.04■□□□□ 0.64
RNF138Q8WVD3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
RNF138Q8WVD3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF138Q8WVD3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF138Q8WVD3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF138Q8WVD3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF138Q8WVD3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF138Q8WVD3 AL162412.1-201ENST00000567129 965 ntBASIC19.03■□□□□ 0.64
RNF138Q8WVD3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.03■□□□□ 0.64
RNF138Q8WVD3 AC231657.2-201ENST00000624556 255 ntBASIC19.03■□□□□ 0.64
RNF138Q8WVD3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms