Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
ARHGEF40Q8TER5 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC31.57■■■□□ 2.64
ARHGEF40Q8TER5 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
ARHGEF40Q8TER5 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
ARHGEF40Q8TER5 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
ARHGEF40Q8TER5 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC31.57■■■□□ 2.64
ARHGEF40Q8TER5 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC31.57■■■□□ 2.64
ARHGEF40Q8TER5 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
ARHGEF40Q8TER5 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC31.56■■■□□ 2.64
ARHGEF40Q8TER5 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC31.56■■■□□ 2.64
ARHGEF40Q8TER5 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
ARHGEF40Q8TER5 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC31.56■■■□□ 2.64
ARHGEF40Q8TER5 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
ARHGEF40Q8TER5 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
ARHGEF40Q8TER5 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
ARHGEF40Q8TER5 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
ARHGEF40Q8TER5 MTDHP1-201ENST00000605323 784 ntBASIC31.55■■■□□ 2.64
ARHGEF40Q8TER5 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
ARHGEF40Q8TER5 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC31.55■■■□□ 2.64
ARHGEF40Q8TER5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
ARHGEF40Q8TER5 AC239809.2-201ENST00000415381 517 ntBASIC31.54■■■□□ 2.64
ARHGEF40Q8TER5 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC31.54■■■□□ 2.64
ARHGEF40Q8TER5 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
ARHGEF40Q8TER5 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
ARHGEF40Q8TER5 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
ARHGEF40Q8TER5 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
ARHGEF40Q8TER5 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
ARHGEF40Q8TER5 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
ARHGEF40Q8TER5 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC31.54■■■□□ 2.64
ARHGEF40Q8TER5 LY6E-205ENST00000519611 635 ntTSL 3 BASIC31.54■■■□□ 2.64
ARHGEF40Q8TER5 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC31.54■■■□□ 2.64
ARHGEF40Q8TER5 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
ARHGEF40Q8TER5 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC31.54■■■□□ 2.64
ARHGEF40Q8TER5 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
ARHGEF40Q8TER5 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC31.53■■■□□ 2.64
ARHGEF40Q8TER5 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
ARHGEF40Q8TER5 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
ARHGEF40Q8TER5 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
ARHGEF40Q8TER5 REXO2-208ENST00000539754 791 ntTSL 2 BASIC31.53■■■□□ 2.64
ARHGEF40Q8TER5 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC31.53■■■□□ 2.64
ARHGEF40Q8TER5 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
ARHGEF40Q8TER5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
ARHGEF40Q8TER5 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ARHGEF40Q8TER5 CRK-204ENST00000574295 1391 ntTSL 5 BASIC31.52■■■□□ 2.64
ARHGEF40Q8TER5 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC31.52■■■□□ 2.64
ARHGEF40Q8TER5 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC31.52■■■□□ 2.64
ARHGEF40Q8TER5 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
ARHGEF40Q8TER5 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
ARHGEF40Q8TER5 MFF-205ENST00000354503 1085 ntTSL 2 BASIC31.52■■■□□ 2.64
ARHGEF40Q8TER5 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
ARHGEF40Q8TER5 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ARHGEF40Q8TER5 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ARHGEF40Q8TER5 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC31.52■■■□□ 2.64
ARHGEF40Q8TER5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC31.52■■■□□ 2.64
ARHGEF40Q8TER5 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.64
ARHGEF40Q8TER5 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC31.51■■■□□ 2.63
ARHGEF40Q8TER5 PENK-204ENST00000518770 863 ntTSL 2 BASIC31.51■■■□□ 2.63
ARHGEF40Q8TER5 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
ARHGEF40Q8TER5 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC31.51■■■□□ 2.63
ARHGEF40Q8TER5 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC31.51■■■□□ 2.63
ARHGEF40Q8TER5 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
ARHGEF40Q8TER5 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
ARHGEF40Q8TER5 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
ARHGEF40Q8TER5 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC31.51■■■□□ 2.63
ARHGEF40Q8TER5 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC31.5■■■□□ 2.63
ARHGEF40Q8TER5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC31.5■■■□□ 2.63
ARHGEF40Q8TER5 AL353708.3-201ENST00000610272 989 ntBASIC31.5■■■□□ 2.63
ARHGEF40Q8TER5 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
ARHGEF40Q8TER5 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
ARHGEF40Q8TER5 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC31.5■■■□□ 2.63
ARHGEF40Q8TER5 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
ARHGEF40Q8TER5 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC31.49■■■□□ 2.63
ARHGEF40Q8TER5 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC31.49■■■□□ 2.63
ARHGEF40Q8TER5 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
ARHGEF40Q8TER5 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
ARHGEF40Q8TER5 AL135905.2-201ENST00000584934 1404 ntBASIC31.49■■■□□ 2.63
ARHGEF40Q8TER5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
ARHGEF40Q8TER5 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
ARHGEF40Q8TER5 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
ARHGEF40Q8TER5 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
ARHGEF40Q8TER5 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
ARHGEF40Q8TER5 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC31.49■■■□□ 2.63
ARHGEF40Q8TER5 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC31.49■■■□□ 2.63
ARHGEF40Q8TER5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC31.49■■■□□ 2.63
ARHGEF40Q8TER5 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
ARHGEF40Q8TER5 AC105020.6-201ENST00000621523 1217 ntBASIC31.49■■■□□ 2.63
ARHGEF40Q8TER5 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC31.49■■■□□ 2.63
ARHGEF40Q8TER5 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
ARHGEF40Q8TER5 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
ARHGEF40Q8TER5 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
ARHGEF40Q8TER5 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
ARHGEF40Q8TER5 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
ARHGEF40Q8TER5 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC31.48■■■□□ 2.63
ARHGEF40Q8TER5 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC31.48■■■□□ 2.63
ARHGEF40Q8TER5 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
ARHGEF40Q8TER5 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC31.48■■■□□ 2.63
ARHGEF40Q8TER5 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
ARHGEF40Q8TER5 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
ARHGEF40Q8TER5 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
ARHGEF40Q8TER5 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC31.47■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms