Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.13■□□□□ 0.65
CNIH3Q8TBE1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CNIH3Q8TBE1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNIH3Q8TBE1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNIH3Q8TBE1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNIH3Q8TBE1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNIH3Q8TBE1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNIH3Q8TBE1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
CNIH3Q8TBE1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.13■□□□□ 0.65
CNIH3Q8TBE1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.13■□□□□ 0.65
CNIH3Q8TBE1 AL451085.2-201ENST00000605085 799 ntBASIC19.13■□□□□ 0.65
CNIH3Q8TBE1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNIH3Q8TBE1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CNIH3Q8TBE1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CNIH3Q8TBE1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CNIH3Q8TBE1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.13■□□□□ 0.65
CNIH3Q8TBE1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CNIH3Q8TBE1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CNIH3Q8TBE1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.13■□□□□ 0.65
CNIH3Q8TBE1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CNIH3Q8TBE1 AL020996.1-203ENST00000536896 2307 ntBASIC19.13■□□□□ 0.65
CNIH3Q8TBE1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CNIH3Q8TBE1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.13■□□□□ 0.65
CNIH3Q8TBE1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.13■□□□□ 0.65
CNIH3Q8TBE1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNIH3Q8TBE1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNIH3Q8TBE1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNIH3Q8TBE1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNIH3Q8TBE1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNIH3Q8TBE1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNIH3Q8TBE1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNIH3Q8TBE1 AC020907.5-201ENST00000624372 1936 ntBASIC19.12■□□□□ 0.65
CNIH3Q8TBE1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNIH3Q8TBE1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNIH3Q8TBE1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNIH3Q8TBE1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNIH3Q8TBE1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNIH3Q8TBE1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.12■□□□□ 0.65
CNIH3Q8TBE1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNIH3Q8TBE1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CNIH3Q8TBE1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNIH3Q8TBE1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNIH3Q8TBE1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNIH3Q8TBE1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.11■□□□□ 0.65
CNIH3Q8TBE1 AC133637.1-201ENST00000624115 1537 ntBASIC19.11■□□□□ 0.65
CNIH3Q8TBE1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNIH3Q8TBE1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.11■□□□□ 0.65
CNIH3Q8TBE1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNIH3Q8TBE1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNIH3Q8TBE1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNIH3Q8TBE1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNIH3Q8TBE1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.11■□□□□ 0.65
CNIH3Q8TBE1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.11■□□□□ 0.65
CNIH3Q8TBE1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNIH3Q8TBE1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
CNIH3Q8TBE1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNIH3Q8TBE1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.11■□□□□ 0.65
CNIH3Q8TBE1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNIH3Q8TBE1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.11■□□□□ 0.65
CNIH3Q8TBE1 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNIH3Q8TBE1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
CNIH3Q8TBE1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNIH3Q8TBE1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.1■□□□□ 0.65
CNIH3Q8TBE1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNIH3Q8TBE1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNIH3Q8TBE1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CNIH3Q8TBE1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNIH3Q8TBE1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNIH3Q8TBE1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNIH3Q8TBE1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
CNIH3Q8TBE1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.1■□□□□ 0.65
CNIH3Q8TBE1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.1■□□□□ 0.65
CNIH3Q8TBE1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.1■□□□□ 0.65
CNIH3Q8TBE1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.1■□□□□ 0.65
CNIH3Q8TBE1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNIH3Q8TBE1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.1■□□□□ 0.65
CNIH3Q8TBE1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CNIH3Q8TBE1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.1■□□□□ 0.65
CNIH3Q8TBE1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNIH3Q8TBE1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNIH3Q8TBE1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.1■□□□□ 0.65
CNIH3Q8TBE1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNIH3Q8TBE1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.1■□□□□ 0.65
CNIH3Q8TBE1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms