Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.52
SMARCC2Q8TAQ2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
SMARCC2Q8TAQ2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC24.57■■□□□ 1.52
SMARCC2Q8TAQ2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SMARCC2Q8TAQ2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
SMARCC2Q8TAQ2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC24.57■■□□□ 1.52
SMARCC2Q8TAQ2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SMARCC2Q8TAQ2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC24.57■■□□□ 1.52
SMARCC2Q8TAQ2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC24.57■■□□□ 1.52
SMARCC2Q8TAQ2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC24.57■■□□□ 1.52
SMARCC2Q8TAQ2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC24.57■■□□□ 1.52
SMARCC2Q8TAQ2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC24.57■■□□□ 1.52
SMARCC2Q8TAQ2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC24.57■■□□□ 1.52
SMARCC2Q8TAQ2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SMARCC2Q8TAQ2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SMARCC2Q8TAQ2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
SMARCC2Q8TAQ2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SMARCC2Q8TAQ2 AC004854.2-201ENST00000608450 1441 ntBASIC24.56■■□□□ 1.52
SMARCC2Q8TAQ2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SMARCC2Q8TAQ2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SMARCC2Q8TAQ2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC24.56■■□□□ 1.52
SMARCC2Q8TAQ2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC24.56■■□□□ 1.52
SMARCC2Q8TAQ2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC24.56■■□□□ 1.52
SMARCC2Q8TAQ2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
SMARCC2Q8TAQ2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC24.56■■□□□ 1.52
SMARCC2Q8TAQ2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC24.56■■□□□ 1.52
SMARCC2Q8TAQ2 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SMARCC2Q8TAQ2 AP004607.4-201ENST00000530158 1459 ntBASIC24.56■■□□□ 1.52
SMARCC2Q8TAQ2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SMARCC2Q8TAQ2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SMARCC2Q8TAQ2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SMARCC2Q8TAQ2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SMARCC2Q8TAQ2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC24.56■■□□□ 1.52
SMARCC2Q8TAQ2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
SMARCC2Q8TAQ2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SMARCC2Q8TAQ2 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMARCC2Q8TAQ2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMARCC2Q8TAQ2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SMARCC2Q8TAQ2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMARCC2Q8TAQ2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC24.55■■□□□ 1.52
SMARCC2Q8TAQ2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC24.55■■□□□ 1.52
SMARCC2Q8TAQ2 KRT18P61-201ENST00000585825 1298 ntBASIC24.55■■□□□ 1.52
SMARCC2Q8TAQ2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC24.55■■□□□ 1.52
SMARCC2Q8TAQ2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMARCC2Q8TAQ2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SMARCC2Q8TAQ2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMARCC2Q8TAQ2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMARCC2Q8TAQ2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
SMARCC2Q8TAQ2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SMARCC2Q8TAQ2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SMARCC2Q8TAQ2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SMARCC2Q8TAQ2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC24.54■■□□□ 1.52
SMARCC2Q8TAQ2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.54■■□□□ 1.52
SMARCC2Q8TAQ2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC24.54■■□□□ 1.52
SMARCC2Q8TAQ2 IKBKGP1-201ENST00000612193 1073 ntBASIC24.54■■□□□ 1.52
SMARCC2Q8TAQ2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SMARCC2Q8TAQ2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC24.54■■□□□ 1.52
SMARCC2Q8TAQ2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC24.54■■□□□ 1.52
SMARCC2Q8TAQ2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SMARCC2Q8TAQ2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC24.53■■□□□ 1.52
SMARCC2Q8TAQ2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SMARCC2Q8TAQ2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
SMARCC2Q8TAQ2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SMARCC2Q8TAQ2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SMARCC2Q8TAQ2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC24.53■■□□□ 1.52
SMARCC2Q8TAQ2 TESC-206ENST00000541210 936 ntTSL 3 BASIC24.53■■□□□ 1.52
SMARCC2Q8TAQ2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC24.53■■□□□ 1.52
SMARCC2Q8TAQ2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC24.53■■□□□ 1.52
SMARCC2Q8TAQ2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC24.53■■□□□ 1.52
SMARCC2Q8TAQ2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
SMARCC2Q8TAQ2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC24.53■■□□□ 1.52
SMARCC2Q8TAQ2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
SMARCC2Q8TAQ2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC24.52■■□□□ 1.52
SMARCC2Q8TAQ2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC24.52■■□□□ 1.52
SMARCC2Q8TAQ2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SMARCC2Q8TAQ2 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC24.52■■□□□ 1.52
SMARCC2Q8TAQ2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
SMARCC2Q8TAQ2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SMARCC2Q8TAQ2 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SMARCC2Q8TAQ2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SMARCC2Q8TAQ2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SMARCC2Q8TAQ2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SMARCC2Q8TAQ2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SMARCC2Q8TAQ2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC24.52■■□□□ 1.52
SMARCC2Q8TAQ2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SMARCC2Q8TAQ2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC24.51■■□□□ 1.51
SMARCC2Q8TAQ2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC24.51■■□□□ 1.51
SMARCC2Q8TAQ2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SMARCC2Q8TAQ2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SMARCC2Q8TAQ2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SMARCC2Q8TAQ2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SMARCC2Q8TAQ2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
SMARCC2Q8TAQ2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC24.51■■□□□ 1.51
SMARCC2Q8TAQ2 FXN-202ENST00000396364 980 ntTSL 5 BASIC24.51■■□□□ 1.51
SMARCC2Q8TAQ2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC24.51■■□□□ 1.51
SMARCC2Q8TAQ2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.51■■□□□ 1.51
SMARCC2Q8TAQ2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SMARCC2Q8TAQ2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
SMARCC2Q8TAQ2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC24.51■■□□□ 1.51
SMARCC2Q8TAQ2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms