Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDND2Q8NHS1 NCF1B-203ENST00000435988 1254 ntBASIC17.77■□□□□ 0.44
CLDND2Q8NHS1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.77■□□□□ 0.44
CLDND2Q8NHS1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDND2Q8NHS1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CLDND2Q8NHS1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDND2Q8NHS1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.77■□□□□ 0.44
CLDND2Q8NHS1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.77■□□□□ 0.44
CLDND2Q8NHS1 AL109923.1-201ENST00000618799 583 ntBASIC17.77■□□□□ 0.44
CLDND2Q8NHS1 AC231657.2-201ENST00000624556 255 ntBASIC17.77■□□□□ 0.44
CLDND2Q8NHS1 FBXW4P1-201ENST00000426721 2239 ntBASIC17.77■□□□□ 0.44
CLDND2Q8NHS1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDND2Q8NHS1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDND2Q8NHS1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CLDND2Q8NHS1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDND2Q8NHS1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDND2Q8NHS1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CLDND2Q8NHS1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
CLDND2Q8NHS1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDND2Q8NHS1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDND2Q8NHS1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDND2Q8NHS1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.76■□□□□ 0.43
CLDND2Q8NHS1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDND2Q8NHS1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDND2Q8NHS1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDND2Q8NHS1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDND2Q8NHS1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDND2Q8NHS1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDND2Q8NHS1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDND2Q8NHS1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.76■□□□□ 0.43
CLDND2Q8NHS1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CLDND2Q8NHS1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDND2Q8NHS1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDND2Q8NHS1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.76■□□□□ 0.43
CLDND2Q8NHS1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDND2Q8NHS1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.76■□□□□ 0.43
CLDND2Q8NHS1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.76■□□□□ 0.43
CLDND2Q8NHS1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDND2Q8NHS1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.76■□□□□ 0.43
CLDND2Q8NHS1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CLDND2Q8NHS1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDND2Q8NHS1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDND2Q8NHS1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDND2Q8NHS1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDND2Q8NHS1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.76■□□□□ 0.43
CLDND2Q8NHS1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDND2Q8NHS1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDND2Q8NHS1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDND2Q8NHS1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLDND2Q8NHS1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDND2Q8NHS1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLDND2Q8NHS1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDND2Q8NHS1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLDND2Q8NHS1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.75■□□□□ 0.43
CLDND2Q8NHS1 GPX1P1-201ENST00000388829 606 ntBASIC17.75■□□□□ 0.43
CLDND2Q8NHS1 AL355802.2-201ENST00000402069 882 ntBASIC17.75■□□□□ 0.43
CLDND2Q8NHS1 AC007322.1-201ENST00000426983 750 ntBASIC17.75■□□□□ 0.43
CLDND2Q8NHS1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDND2Q8NHS1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.75■□□□□ 0.43
CLDND2Q8NHS1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.75■□□□□ 0.43
CLDND2Q8NHS1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDND2Q8NHS1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDND2Q8NHS1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDND2Q8NHS1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CLDND2Q8NHS1 AC092053.2-201ENST00000640557 1818 ntBASIC17.75■□□□□ 0.43
CLDND2Q8NHS1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CLDND2Q8NHS1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.74■□□□□ 0.43
CLDND2Q8NHS1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLDND2Q8NHS1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.74■□□□□ 0.43
CLDND2Q8NHS1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CLDND2Q8NHS1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDND2Q8NHS1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDND2Q8NHS1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.74■□□□□ 0.43
CLDND2Q8NHS1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLDND2Q8NHS1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
CLDND2Q8NHS1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.74■□□□□ 0.43
CLDND2Q8NHS1 KRT18P20-201ENST00000548986 1279 ntBASIC17.74■□□□□ 0.43
CLDND2Q8NHS1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.74■□□□□ 0.43
CLDND2Q8NHS1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.74■□□□□ 0.43
CLDND2Q8NHS1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
CLDND2Q8NHS1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CLDND2Q8NHS1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.74■□□□□ 0.43
CLDND2Q8NHS1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLDND2Q8NHS1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.74■□□□□ 0.43
CLDND2Q8NHS1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLDND2Q8NHS1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDND2Q8NHS1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.74■□□□□ 0.43
CLDND2Q8NHS1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDND2Q8NHS1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLDND2Q8NHS1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDND2Q8NHS1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDND2Q8NHS1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CLDND2Q8NHS1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLDND2Q8NHS1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDND2Q8NHS1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDND2Q8NHS1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.73■□□□□ 0.43
CLDND2Q8NHS1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDND2Q8NHS1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDND2Q8NHS1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CLDND2Q8NHS1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms