Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC25.94■■□□□ 1.74
RTL9Q8NET4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
RTL9Q8NET4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RTL9Q8NET4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC25.94■■□□□ 1.74
RTL9Q8NET4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC25.94■■□□□ 1.74
RTL9Q8NET4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC25.94■■□□□ 1.74
RTL9Q8NET4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC25.94■■□□□ 1.74
RTL9Q8NET4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC25.94■■□□□ 1.74
RTL9Q8NET4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC25.94■■□□□ 1.74
RTL9Q8NET4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RTL9Q8NET4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
RTL9Q8NET4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.93■■□□□ 1.74
RTL9Q8NET4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC25.93■■□□□ 1.74
RTL9Q8NET4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
RTL9Q8NET4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
RTL9Q8NET4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC25.93■■□□□ 1.74
RTL9Q8NET4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
RTL9Q8NET4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC25.93■■□□□ 1.74
RTL9Q8NET4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
RTL9Q8NET4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RTL9Q8NET4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC25.93■■□□□ 1.74
RTL9Q8NET4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
RTL9Q8NET4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
RTL9Q8NET4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RTL9Q8NET4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RTL9Q8NET4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
RTL9Q8NET4 AC242852.2-201ENST00000615738 1807 ntBASIC25.92■■□□□ 1.74
RTL9Q8NET4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RTL9Q8NET4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
RTL9Q8NET4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
RTL9Q8NET4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC25.92■■□□□ 1.74
RTL9Q8NET4 AC091874.3-201ENST00000512672 1195 ntBASIC25.92■■□□□ 1.74
RTL9Q8NET4 AC100791.3-201ENST00000617619 330 ntBASIC25.92■■□□□ 1.74
RTL9Q8NET4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC25.92■■□□□ 1.74
RTL9Q8NET4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RTL9Q8NET4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
RTL9Q8NET4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
RTL9Q8NET4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
RTL9Q8NET4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
RTL9Q8NET4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RTL9Q8NET4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RTL9Q8NET4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RTL9Q8NET4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC25.91■■□□□ 1.74
RTL9Q8NET4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC25.91■■□□□ 1.74
RTL9Q8NET4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC25.91■■□□□ 1.74
RTL9Q8NET4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC25.91■■□□□ 1.74
RTL9Q8NET4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
RTL9Q8NET4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
RTL9Q8NET4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RTL9Q8NET4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RTL9Q8NET4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RTL9Q8NET4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RTL9Q8NET4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RTL9Q8NET4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RTL9Q8NET4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC25.9■■□□□ 1.74
RTL9Q8NET4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC25.9■■□□□ 1.74
RTL9Q8NET4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RTL9Q8NET4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC25.9■■□□□ 1.74
RTL9Q8NET4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
RTL9Q8NET4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC25.9■■□□□ 1.74
RTL9Q8NET4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RTL9Q8NET4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
RTL9Q8NET4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.89■■□□□ 1.74
RTL9Q8NET4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RTL9Q8NET4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RTL9Q8NET4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
RTL9Q8NET4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RTL9Q8NET4 SAPCD2P1-201ENST00000395413 1184 ntBASIC25.89■■□□□ 1.74
RTL9Q8NET4 KRT18P29-201ENST00000397031 1267 ntBASIC25.89■■□□□ 1.74
RTL9Q8NET4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC25.89■■□□□ 1.74
RTL9Q8NET4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
RTL9Q8NET4 DUSP5P2-201ENST00000426873 1033 ntBASIC25.89■■□□□ 1.74
RTL9Q8NET4 AC098590.1-201ENST00000468126 897 ntBASIC25.89■■□□□ 1.74
RTL9Q8NET4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC25.89■■□□□ 1.74
RTL9Q8NET4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC25.89■■□□□ 1.74
RTL9Q8NET4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC25.89■■□□□ 1.73
RTL9Q8NET4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
RTL9Q8NET4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC25.89■■□□□ 1.73
RTL9Q8NET4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.73
RTL9Q8NET4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RTL9Q8NET4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RTL9Q8NET4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
RTL9Q8NET4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC25.88■■□□□ 1.73
RTL9Q8NET4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RTL9Q8NET4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC25.88■■□□□ 1.73
RTL9Q8NET4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC25.88■■□□□ 1.73
RTL9Q8NET4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
RTL9Q8NET4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
RTL9Q8NET4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RTL9Q8NET4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
RTL9Q8NET4 RPS2P52-201ENST00000469610 820 ntBASIC25.88■■□□□ 1.73
RTL9Q8NET4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC25.88■■□□□ 1.73
RTL9Q8NET4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RTL9Q8NET4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
RTL9Q8NET4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RTL9Q8NET4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RTL9Q8NET4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
RTL9Q8NET4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RTL9Q8NET4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RTL9Q8NET4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms