Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ZNF248Q8NDW4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF248Q8NDW4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.03■□□□□ 0.8
ZNF248Q8NDW4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF248Q8NDW4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF248Q8NDW4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF248Q8NDW4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF248Q8NDW4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
ZNF248Q8NDW4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF248Q8NDW4 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.02■□□□□ 0.8
ZNF248Q8NDW4 UBE2SP1-201ENST00000450587 669 ntBASIC20.02■□□□□ 0.8
ZNF248Q8NDW4 UNC93B5-201ENST00000530315 699 ntBASIC20.02■□□□□ 0.8
ZNF248Q8NDW4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF248Q8NDW4 AL162412.1-201ENST00000567129 965 ntBASIC20.02■□□□□ 0.8
ZNF248Q8NDW4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.02■□□□□ 0.8
ZNF248Q8NDW4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
ZNF248Q8NDW4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF248Q8NDW4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.02■□□□□ 0.8
ZNF248Q8NDW4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF248Q8NDW4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.02■□□□□ 0.8
ZNF248Q8NDW4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF248Q8NDW4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF248Q8NDW4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF248Q8NDW4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ZNF248Q8NDW4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF248Q8NDW4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.01■□□□□ 0.79
ZNF248Q8NDW4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF248Q8NDW4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF248Q8NDW4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF248Q8NDW4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.01■□□□□ 0.79
ZNF248Q8NDW4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.01■□□□□ 0.79
ZNF248Q8NDW4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF248Q8NDW4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF248Q8NDW4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.01■□□□□ 0.79
ZNF248Q8NDW4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.01■□□□□ 0.79
ZNF248Q8NDW4 AP003097.1-201ENST00000530657 1135 ntBASIC20.01■□□□□ 0.79
ZNF248Q8NDW4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.01■□□□□ 0.79
ZNF248Q8NDW4 AC008175.2-201ENST00000612840 297 ntBASIC20.01■□□□□ 0.79
ZNF248Q8NDW4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF248Q8NDW4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.01■□□□□ 0.79
ZNF248Q8NDW4 AC073648.6-201ENST00000641589 218 ntBASIC20.01■□□□□ 0.79
ZNF248Q8NDW4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF248Q8NDW4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF248Q8NDW4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ZNF248Q8NDW4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF248Q8NDW4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF248Q8NDW4 AC010980.2-201ENST00000587099 1412 ntBASIC20.01■□□□□ 0.79
ZNF248Q8NDW4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF248Q8NDW4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
ZNF248Q8NDW4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF248Q8NDW4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF248Q8NDW4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZNF248Q8NDW4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20■□□□□ 0.79
ZNF248Q8NDW4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZNF248Q8NDW4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
ZNF248Q8NDW4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZNF248Q8NDW4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20■□□□□ 0.79
ZNF248Q8NDW4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF248Q8NDW4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20■□□□□ 0.79
ZNF248Q8NDW4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZNF248Q8NDW4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF248Q8NDW4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF248Q8NDW4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF248Q8NDW4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZNF248Q8NDW4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF248Q8NDW4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20■□□□□ 0.79
ZNF248Q8NDW4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ZNF248Q8NDW4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
ZNF248Q8NDW4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF248Q8NDW4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF248Q8NDW4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF248Q8NDW4 MIR718-201ENST00000390190 70 ntBASIC19.99■□□□□ 0.79
ZNF248Q8NDW4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF248Q8NDW4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.99■□□□□ 0.79
ZNF248Q8NDW4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF248Q8NDW4 AL591742.1-201ENST00000604433 565 ntBASIC19.99■□□□□ 0.79
ZNF248Q8NDW4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF248Q8NDW4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF248Q8NDW4 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.99■□□□□ 0.79
ZNF248Q8NDW4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.99■□□□□ 0.79
ZNF248Q8NDW4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
ZNF248Q8NDW4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF248Q8NDW4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF248Q8NDW4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF248Q8NDW4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ZNF248Q8NDW4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
ZNF248Q8NDW4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF248Q8NDW4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF248Q8NDW4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
ZNF248Q8NDW4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.98■□□□□ 0.79
ZNF248Q8NDW4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
ZNF248Q8NDW4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
ZNF248Q8NDW4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF248Q8NDW4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF248Q8NDW4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.98■□□□□ 0.79
ZNF248Q8NDW4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.98■□□□□ 0.79
ZNF248Q8NDW4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF248Q8NDW4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ZNF248Q8NDW4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
ZNF248Q8NDW4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms