Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC168Q8NDH2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC168Q8NDH2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC168Q8NDH2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
CCDC168Q8NDH2 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC168Q8NDH2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCDC168Q8NDH2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC168Q8NDH2 RARRES2P10-201ENST00000564312 460 ntBASIC17.69■□□□□ 0.42
CCDC168Q8NDH2 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.69■□□□□ 0.42
CCDC168Q8NDH2 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.69■□□□□ 0.42
CCDC168Q8NDH2 NTF6B-201ENST00000591913 560 ntBASIC17.69■□□□□ 0.42
CCDC168Q8NDH2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC168Q8NDH2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC168Q8NDH2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC168Q8NDH2 AC138932.3-201ENST00000567634 1902 ntBASIC17.68■□□□□ 0.42
CCDC168Q8NDH2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC168Q8NDH2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC168Q8NDH2 AC100791.3-201ENST00000617619 330 ntBASIC17.68■□□□□ 0.42
CCDC168Q8NDH2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC168Q8NDH2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC168Q8NDH2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC168Q8NDH2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC168Q8NDH2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
CCDC168Q8NDH2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC168Q8NDH2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC168Q8NDH2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC168Q8NDH2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.67■□□□□ 0.42
CCDC168Q8NDH2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.67■□□□□ 0.42
CCDC168Q8NDH2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.67■□□□□ 0.42
CCDC168Q8NDH2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC168Q8NDH2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC168Q8NDH2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC168Q8NDH2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC168Q8NDH2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC168Q8NDH2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCDC168Q8NDH2 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC168Q8NDH2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC168Q8NDH2 AC145676.1-201ENST00000514988 2004 ntBASIC17.67■□□□□ 0.42
CCDC168Q8NDH2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC168Q8NDH2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC168Q8NDH2 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC168Q8NDH2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC168Q8NDH2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC168Q8NDH2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 KRT18P57-201ENST00000443599 1254 ntBASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 AC124016.1-201ENST00000609552 612 ntBASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 AC008175.2-201ENST00000612840 297 ntBASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 AC145285.6-201ENST00000604632 637 ntBASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC168Q8NDH2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC168Q8NDH2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CCDC168Q8NDH2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC168Q8NDH2 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC168Q8NDH2 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC168Q8NDH2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC168Q8NDH2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC168Q8NDH2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC168Q8NDH2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC168Q8NDH2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC168Q8NDH2 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC168Q8NDH2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CCDC168Q8NDH2 AC053503.5-201ENST00000601508 636 ntBASIC17.65■□□□□ 0.42
CCDC168Q8NDH2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC168Q8NDH2 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC168Q8NDH2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC168Q8NDH2 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC168Q8NDH2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC168Q8NDH2 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC168Q8NDH2 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC168Q8NDH2 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.64■□□□□ 0.42
CCDC168Q8NDH2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms