Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.53■□□□□ 0.24
TMEM116Q8NCL8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM116Q8NCL8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM116Q8NCL8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM116Q8NCL8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TMEM116Q8NCL8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM116Q8NCL8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM116Q8NCL8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.53■□□□□ 0.24
TMEM116Q8NCL8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.53■□□□□ 0.24
TMEM116Q8NCL8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM116Q8NCL8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM116Q8NCL8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.53■□□□□ 0.24
TMEM116Q8NCL8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.53■□□□□ 0.24
TMEM116Q8NCL8 SMUG1P1-201ENST00000590640 811 ntBASIC16.53■□□□□ 0.24
TMEM116Q8NCL8 AC008764.7-201ENST00000593779 1081 ntBASIC16.53■□□□□ 0.24
TMEM116Q8NCL8 AC110285.6-201ENST00000617652 491 ntBASIC16.53■□□□□ 0.24
TMEM116Q8NCL8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM116Q8NCL8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM116Q8NCL8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM116Q8NCL8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM116Q8NCL8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM116Q8NCL8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.53■□□□□ 0.24
TMEM116Q8NCL8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TMEM116Q8NCL8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM116Q8NCL8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM116Q8NCL8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM116Q8NCL8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TMEM116Q8NCL8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM116Q8NCL8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM116Q8NCL8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM116Q8NCL8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM116Q8NCL8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM116Q8NCL8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM116Q8NCL8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM116Q8NCL8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.52■□□□□ 0.24
TMEM116Q8NCL8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM116Q8NCL8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM116Q8NCL8 EDA-201ENST00000338901 1233 ntBASIC16.52■□□□□ 0.24
TMEM116Q8NCL8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM116Q8NCL8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM116Q8NCL8 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.52■□□□□ 0.24
TMEM116Q8NCL8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.52■□□□□ 0.24
TMEM116Q8NCL8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM116Q8NCL8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM116Q8NCL8 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM116Q8NCL8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
TMEM116Q8NCL8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM116Q8NCL8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM116Q8NCL8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
TMEM116Q8NCL8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM116Q8NCL8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TMEM116Q8NCL8 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
TMEM116Q8NCL8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM116Q8NCL8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM116Q8NCL8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM116Q8NCL8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM116Q8NCL8 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM116Q8NCL8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM116Q8NCL8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM116Q8NCL8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TMEM116Q8NCL8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TMEM116Q8NCL8 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM116Q8NCL8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM116Q8NCL8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
TMEM116Q8NCL8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.51■□□□□ 0.23
TMEM116Q8NCL8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM116Q8NCL8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM116Q8NCL8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM116Q8NCL8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM116Q8NCL8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM116Q8NCL8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM116Q8NCL8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM116Q8NCL8 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM116Q8NCL8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM116Q8NCL8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM116Q8NCL8 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM116Q8NCL8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM116Q8NCL8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM116Q8NCL8 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM116Q8NCL8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.5■□□□□ 0.23
TMEM116Q8NCL8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM116Q8NCL8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM116Q8NCL8 AC027682.1-201ENST00000562846 899 ntBASIC16.5■□□□□ 0.23
TMEM116Q8NCL8 AL139246.5-201ENST00000606645 996 ntBASIC16.5■□□□□ 0.23
TMEM116Q8NCL8 AL355001.2-201ENST00000620617 1191 ntBASIC16.5■□□□□ 0.23
TMEM116Q8NCL8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TMEM116Q8NCL8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM116Q8NCL8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.5■□□□□ 0.23
TMEM116Q8NCL8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM116Q8NCL8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM116Q8NCL8 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM116Q8NCL8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.5■□□□□ 0.23
TMEM116Q8NCL8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM116Q8NCL8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM116Q8NCL8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
TMEM116Q8NCL8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM116Q8NCL8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM116Q8NCL8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM116Q8NCL8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM116Q8NCL8 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms