Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNEP1R1Q8N9A8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNEP1R1Q8N9A8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CNEP1R1Q8N9A8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNEP1R1Q8N9A8 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNEP1R1Q8N9A8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNEP1R1Q8N9A8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNEP1R1Q8N9A8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNEP1R1Q8N9A8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.61■□□□□ 0.57
CNEP1R1Q8N9A8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.61■□□□□ 0.57
CNEP1R1Q8N9A8 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNEP1R1Q8N9A8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.61■□□□□ 0.57
CNEP1R1Q8N9A8 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.61■□□□□ 0.57
CNEP1R1Q8N9A8 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.61■□□□□ 0.57
CNEP1R1Q8N9A8 AF201337.1-201ENST00000520239 748 ntBASIC18.61■□□□□ 0.57
CNEP1R1Q8N9A8 AC105036.2-201ENST00000569468 176 ntBASIC18.61■□□□□ 0.57
CNEP1R1Q8N9A8 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CNEP1R1Q8N9A8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CNEP1R1Q8N9A8 AC008694.1-202ENST00000636953 945 ntBASIC18.61■□□□□ 0.57
CNEP1R1Q8N9A8 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNEP1R1Q8N9A8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.61■□□□□ 0.57
CNEP1R1Q8N9A8 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNEP1R1Q8N9A8 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNEP1R1Q8N9A8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CNEP1R1Q8N9A8 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNEP1R1Q8N9A8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.6■□□□□ 0.57
CNEP1R1Q8N9A8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNEP1R1Q8N9A8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNEP1R1Q8N9A8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNEP1R1Q8N9A8 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.6■□□□□ 0.57
CNEP1R1Q8N9A8 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.6■□□□□ 0.57
CNEP1R1Q8N9A8 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.6■□□□□ 0.57
CNEP1R1Q8N9A8 CYP2T1P-201ENST00000432607 1285 ntBASIC18.6■□□□□ 0.57
CNEP1R1Q8N9A8 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.6■□□□□ 0.57
CNEP1R1Q8N9A8 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.6■□□□□ 0.57
CNEP1R1Q8N9A8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
CNEP1R1Q8N9A8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.6■□□□□ 0.57
CNEP1R1Q8N9A8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNEP1R1Q8N9A8 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNEP1R1Q8N9A8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.6■□□□□ 0.57
CNEP1R1Q8N9A8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
CNEP1R1Q8N9A8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNEP1R1Q8N9A8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNEP1R1Q8N9A8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.6■□□□□ 0.57
CNEP1R1Q8N9A8 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNEP1R1Q8N9A8 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CNEP1R1Q8N9A8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNEP1R1Q8N9A8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNEP1R1Q8N9A8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.59■□□□□ 0.57
CNEP1R1Q8N9A8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNEP1R1Q8N9A8 TSPY6P-201ENST00000448518 926 ntBASIC18.59■□□□□ 0.57
CNEP1R1Q8N9A8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNEP1R1Q8N9A8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.59■□□□□ 0.57
CNEP1R1Q8N9A8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CNEP1R1Q8N9A8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.59■□□□□ 0.57
CNEP1R1Q8N9A8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.59■□□□□ 0.57
CNEP1R1Q8N9A8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.59■□□□□ 0.57
CNEP1R1Q8N9A8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.59■□□□□ 0.57
CNEP1R1Q8N9A8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.59■□□□□ 0.57
CNEP1R1Q8N9A8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNEP1R1Q8N9A8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNEP1R1Q8N9A8 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNEP1R1Q8N9A8 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CNEP1R1Q8N9A8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNEP1R1Q8N9A8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNEP1R1Q8N9A8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CNEP1R1Q8N9A8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CNEP1R1Q8N9A8 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CNEP1R1Q8N9A8 AC068338.2-201ENST00000563278 1430 ntBASIC18.58■□□□□ 0.57
CNEP1R1Q8N9A8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CNEP1R1Q8N9A8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CNEP1R1Q8N9A8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CNEP1R1Q8N9A8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.58■□□□□ 0.57
CNEP1R1Q8N9A8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CNEP1R1Q8N9A8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CNEP1R1Q8N9A8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CNEP1R1Q8N9A8 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CNEP1R1Q8N9A8 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CNEP1R1Q8N9A8 AC007322.4-201ENST00000509611 723 ntBASIC18.58■□□□□ 0.56
CNEP1R1Q8N9A8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CNEP1R1Q8N9A8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.58■□□□□ 0.56
CNEP1R1Q8N9A8 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.58■□□□□ 0.56
CNEP1R1Q8N9A8 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.58■□□□□ 0.56
CNEP1R1Q8N9A8 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CNEP1R1Q8N9A8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CNEP1R1Q8N9A8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CNEP1R1Q8N9A8 C11orf96-202ENST00000528572 1834 ntBASIC18.58■□□□□ 0.56
CNEP1R1Q8N9A8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CNEP1R1Q8N9A8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNEP1R1Q8N9A8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNEP1R1Q8N9A8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNEP1R1Q8N9A8 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNEP1R1Q8N9A8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNEP1R1Q8N9A8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.57■□□□□ 0.56
CNEP1R1Q8N9A8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.57■□□□□ 0.56
CNEP1R1Q8N9A8 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CNEP1R1Q8N9A8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.57■□□□□ 0.56
CNEP1R1Q8N9A8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.57■□□□□ 0.56
CNEP1R1Q8N9A8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.57■□□□□ 0.56
CNEP1R1Q8N9A8 AC069236.1-201ENST00000604339 616 ntBASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms