Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC29.72■■■□□ 2.35
LTBP4Q8N2S1 ST7-205ENST00000393446 2114 ntTSL 5 BASIC29.72■■■□□ 2.35
LTBP4Q8N2S1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
LTBP4Q8N2S1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC29.72■■■□□ 2.35
LTBP4Q8N2S1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
LTBP4Q8N2S1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC29.71■■■□□ 2.35
LTBP4Q8N2S1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
LTBP4Q8N2S1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
LTBP4Q8N2S1 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
LTBP4Q8N2S1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC29.71■■■□□ 2.35
LTBP4Q8N2S1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC29.71■■■□□ 2.35
LTBP4Q8N2S1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC29.71■■■□□ 2.35
LTBP4Q8N2S1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
LTBP4Q8N2S1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC29.71■■■□□ 2.35
LTBP4Q8N2S1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC29.71■■■□□ 2.35
LTBP4Q8N2S1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC29.71■■■□□ 2.35
LTBP4Q8N2S1 Six3os1_6.1-201ENST00000620790 196 ntBASIC29.71■■■□□ 2.35
LTBP4Q8N2S1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC29.71■■■□□ 2.35
LTBP4Q8N2S1 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
LTBP4Q8N2S1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC29.7■■■□□ 2.35
LTBP4Q8N2S1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC29.7■■■□□ 2.34
LTBP4Q8N2S1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC29.7■■■□□ 2.34
LTBP4Q8N2S1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC29.7■■■□□ 2.34
LTBP4Q8N2S1 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
LTBP4Q8N2S1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC29.7■■■□□ 2.34
LTBP4Q8N2S1 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC29.7■■■□□ 2.34
LTBP4Q8N2S1 AL034346.1-201ENST00000568244 1277 ntBASIC29.7■■■□□ 2.34
LTBP4Q8N2S1 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC29.7■■■□□ 2.34
LTBP4Q8N2S1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
LTBP4Q8N2S1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC29.69■■■□□ 2.34
LTBP4Q8N2S1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
LTBP4Q8N2S1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
LTBP4Q8N2S1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC29.69■■■□□ 2.34
LTBP4Q8N2S1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
LTBP4Q8N2S1 MCRIP2P1-201ENST00000394346 511 ntBASIC29.69■■■□□ 2.34
LTBP4Q8N2S1 UPK3BP1-201ENST00000428678 509 ntBASIC29.69■■■□□ 2.34
LTBP4Q8N2S1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC29.69■■■□□ 2.34
LTBP4Q8N2S1 WWOX-216ENST00000569818 525 ntBASIC29.69■■■□□ 2.34
LTBP4Q8N2S1 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC29.69■■■□□ 2.34
LTBP4Q8N2S1 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC29.69■■■□□ 2.34
LTBP4Q8N2S1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC29.68■■■□□ 2.34
LTBP4Q8N2S1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
LTBP4Q8N2S1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
LTBP4Q8N2S1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC29.68■■■□□ 2.34
LTBP4Q8N2S1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC29.68■■■□□ 2.34
LTBP4Q8N2S1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
LTBP4Q8N2S1 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
LTBP4Q8N2S1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC29.67■■■□□ 2.34
LTBP4Q8N2S1 AC091799.1-201ENST00000422823 811 ntBASIC29.67■■■□□ 2.34
LTBP4Q8N2S1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
LTBP4Q8N2S1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC29.67■■■□□ 2.34
LTBP4Q8N2S1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC29.67■■■□□ 2.34
LTBP4Q8N2S1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
LTBP4Q8N2S1 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
LTBP4Q8N2S1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
LTBP4Q8N2S1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC29.67■■■□□ 2.34
LTBP4Q8N2S1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC29.67■■■□□ 2.34
LTBP4Q8N2S1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC29.67■■■□□ 2.34
LTBP4Q8N2S1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC29.67■■■□□ 2.34
LTBP4Q8N2S1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
LTBP4Q8N2S1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
LTBP4Q8N2S1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC29.66■■■□□ 2.34
LTBP4Q8N2S1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
LTBP4Q8N2S1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC29.66■■■□□ 2.34
LTBP4Q8N2S1 AC104076.2-201ENST00000448912 469 ntBASIC29.66■■■□□ 2.34
LTBP4Q8N2S1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC29.66■■■□□ 2.34
LTBP4Q8N2S1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
LTBP4Q8N2S1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
LTBP4Q8N2S1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
LTBP4Q8N2S1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
LTBP4Q8N2S1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
LTBP4Q8N2S1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
LTBP4Q8N2S1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC29.65■■■□□ 2.34
LTBP4Q8N2S1 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
LTBP4Q8N2S1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
LTBP4Q8N2S1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
LTBP4Q8N2S1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC29.65■■■□□ 2.34
LTBP4Q8N2S1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC29.65■■■□□ 2.34
LTBP4Q8N2S1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC29.65■■■□□ 2.34
LTBP4Q8N2S1 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC29.65■■■□□ 2.34
LTBP4Q8N2S1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC29.65■■■□□ 2.34
LTBP4Q8N2S1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC29.65■■■□□ 2.34
LTBP4Q8N2S1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
LTBP4Q8N2S1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
LTBP4Q8N2S1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
LTBP4Q8N2S1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
LTBP4Q8N2S1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
LTBP4Q8N2S1 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
LTBP4Q8N2S1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
LTBP4Q8N2S1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC29.64■■■□□ 2.34
LTBP4Q8N2S1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC29.64■■■□□ 2.34
LTBP4Q8N2S1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC29.64■■■□□ 2.34
LTBP4Q8N2S1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
LTBP4Q8N2S1 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
LTBP4Q8N2S1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
LTBP4Q8N2S1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
LTBP4Q8N2S1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC29.64■■■□□ 2.34
LTBP4Q8N2S1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
LTBP4Q8N2S1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC29.63■■■□□ 2.33
LTBP4Q8N2S1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC29.63■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms