Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC31.46■■■□□ 2.63
ABCA6Q8N139 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
ABCA6Q8N139 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC31.46■■■□□ 2.63
ABCA6Q8N139 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
ABCA6Q8N139 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC31.46■■■□□ 2.63
ABCA6Q8N139 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
ABCA6Q8N139 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
ABCA6Q8N139 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
ABCA6Q8N139 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
ABCA6Q8N139 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC31.46■■■□□ 2.63
ABCA6Q8N139 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC31.45■■■□□ 2.63
ABCA6Q8N139 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC31.45■■■□□ 2.63
ABCA6Q8N139 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
ABCA6Q8N139 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
ABCA6Q8N139 AL589743.5-201ENST00000616611 1050 ntBASIC31.45■■■□□ 2.62
ABCA6Q8N139 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
ABCA6Q8N139 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
ABCA6Q8N139 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC31.44■■■□□ 2.62
ABCA6Q8N139 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
ABCA6Q8N139 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
ABCA6Q8N139 MCRIP2P1-201ENST00000394346 511 ntBASIC31.44■■■□□ 2.62
ABCA6Q8N139 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC31.44■■■□□ 2.62
ABCA6Q8N139 AC087742.1-201ENST00000575880 1738 ntBASIC31.44■■■□□ 2.62
ABCA6Q8N139 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
ABCA6Q8N139 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
ABCA6Q8N139 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
ABCA6Q8N139 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC31.43■■■□□ 2.62
ABCA6Q8N139 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
ABCA6Q8N139 CBFB-203ENST00000561924 584 ntTSL 5 BASIC31.43■■■□□ 2.62
ABCA6Q8N139 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC31.43■■■□□ 2.62
ABCA6Q8N139 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC31.43■■■□□ 2.62
ABCA6Q8N139 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
ABCA6Q8N139 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC31.43■■■□□ 2.62
ABCA6Q8N139 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC31.43■■■□□ 2.62
ABCA6Q8N139 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
ABCA6Q8N139 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC31.43■■■□□ 2.62
ABCA6Q8N139 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
ABCA6Q8N139 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC31.43■■■□□ 2.62
ABCA6Q8N139 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC31.43■■■□□ 2.62
ABCA6Q8N139 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
ABCA6Q8N139 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
ABCA6Q8N139 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
ABCA6Q8N139 POM121L13P-201ENST00000422362 380 ntBASIC31.42■■■□□ 2.62
ABCA6Q8N139 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
ABCA6Q8N139 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
ABCA6Q8N139 TSPY7P-201ENST00000431358 1114 ntBASIC31.42■■■□□ 2.62
ABCA6Q8N139 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC31.42■■■□□ 2.62
ABCA6Q8N139 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC31.42■■■□□ 2.62
ABCA6Q8N139 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC31.42■■■□□ 2.62
ABCA6Q8N139 OR2A1-AS1-207ENST00000486094 819 ntBASIC31.42■■■□□ 2.62
ABCA6Q8N139 KRT18P21-201ENST00000515767 1272 ntBASIC31.42■■■□□ 2.62
ABCA6Q8N139 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC31.42■■■□□ 2.62
ABCA6Q8N139 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC31.42■■■□□ 2.62
ABCA6Q8N139 AC233702.5-201ENST00000584107 538 ntBASIC31.42■■■□□ 2.62
ABCA6Q8N139 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC31.42■■■□□ 2.62
ABCA6Q8N139 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
ABCA6Q8N139 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC31.42■■■□□ 2.62
ABCA6Q8N139 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC31.42■■■□□ 2.62
ABCA6Q8N139 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC31.41■■■□□ 2.62
ABCA6Q8N139 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
ABCA6Q8N139 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
ABCA6Q8N139 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC31.41■■■□□ 2.62
ABCA6Q8N139 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC31.41■■■□□ 2.62
ABCA6Q8N139 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC31.41■■■□□ 2.62
ABCA6Q8N139 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC31.41■■■□□ 2.62
ABCA6Q8N139 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
ABCA6Q8N139 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC31.41■■■□□ 2.62
ABCA6Q8N139 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC31.41■■■□□ 2.62
ABCA6Q8N139 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC31.41■■■□□ 2.62
ABCA6Q8N139 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC31.4■■■□□ 2.62
ABCA6Q8N139 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
ABCA6Q8N139 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC31.4■■■□□ 2.62
ABCA6Q8N139 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC31.4■■■□□ 2.62
ABCA6Q8N139 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC31.4■■■□□ 2.62
ABCA6Q8N139 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC31.4■■■□□ 2.62
ABCA6Q8N139 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
ABCA6Q8N139 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC31.4■■■□□ 2.62
ABCA6Q8N139 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
ABCA6Q8N139 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC31.4■■■□□ 2.62
ABCA6Q8N139 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
ABCA6Q8N139 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC31.4■■■□□ 2.62
ABCA6Q8N139 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
ABCA6Q8N139 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC31.39■■■□□ 2.62
ABCA6Q8N139 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC31.39■■■□□ 2.62
ABCA6Q8N139 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC31.39■■■□□ 2.62
ABCA6Q8N139 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC31.39■■■□□ 2.62
ABCA6Q8N139 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC31.39■■■□□ 2.62
ABCA6Q8N139 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
ABCA6Q8N139 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
ABCA6Q8N139 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
ABCA6Q8N139 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC31.39■■■□□ 2.62
ABCA6Q8N139 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
ABCA6Q8N139 DHDH-203ENST00000522614 776 ntTSL 5 BASIC31.38■■■□□ 2.61
ABCA6Q8N139 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC31.38■■■□□ 2.61
ABCA6Q8N139 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
ABCA6Q8N139 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
ABCA6Q8N139 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
ABCA6Q8N139 SERF2-207ENST00000409614 582 ntTSL 2 BASIC31.38■■■□□ 2.61
ABCA6Q8N139 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC31.38■■■□□ 2.61
ABCA6Q8N139 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms