Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 AL589743.5-201ENST00000616611 1050 ntBASIC29.48■■■□□ 2.31
XRN1Q8IZH2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC29.48■■■□□ 2.31
XRN1Q8IZH2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC29.47■■■□□ 2.31
XRN1Q8IZH2 AC003102.1-202ENST00000563394 1796 ntBASIC29.47■■■□□ 2.31
XRN1Q8IZH2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
XRN1Q8IZH2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
XRN1Q8IZH2 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC29.47■■■□□ 2.31
XRN1Q8IZH2 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC29.47■■■□□ 2.31
XRN1Q8IZH2 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
XRN1Q8IZH2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
XRN1Q8IZH2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC29.47■■■□□ 2.31
XRN1Q8IZH2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC29.47■■■□□ 2.31
XRN1Q8IZH2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC29.46■■■□□ 2.31
XRN1Q8IZH2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
XRN1Q8IZH2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
XRN1Q8IZH2 FAM210CP-201ENST00000445714 574 ntBASIC29.45■■■□□ 2.31
XRN1Q8IZH2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC29.45■■■□□ 2.31
XRN1Q8IZH2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC29.45■■■□□ 2.31
XRN1Q8IZH2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC29.45■■■□□ 2.3
XRN1Q8IZH2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
XRN1Q8IZH2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.3
XRN1Q8IZH2 KRT17P3-201ENST00000420566 1262 ntBASIC29.45■■■□□ 2.3
XRN1Q8IZH2 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC29.45■■■□□ 2.3
XRN1Q8IZH2 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC29.45■■■□□ 2.3
XRN1Q8IZH2 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC29.45■■■□□ 2.3
XRN1Q8IZH2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
XRN1Q8IZH2 LINC01023-201ENST00000606054 436 ntBASIC29.45■■■□□ 2.3
XRN1Q8IZH2 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
XRN1Q8IZH2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC29.44■■■□□ 2.3
XRN1Q8IZH2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC29.44■■■□□ 2.3
XRN1Q8IZH2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC29.44■■■□□ 2.3
XRN1Q8IZH2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC29.44■■■□□ 2.3
XRN1Q8IZH2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
XRN1Q8IZH2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
XRN1Q8IZH2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC29.44■■■□□ 2.3
XRN1Q8IZH2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
XRN1Q8IZH2 AC245052.3-201ENST00000450182 901 ntBASIC29.44■■■□□ 2.3
XRN1Q8IZH2 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC29.44■■■□□ 2.3
XRN1Q8IZH2 REXO2-216ENST00000544196 452 ntTSL 3 BASIC29.44■■■□□ 2.3
XRN1Q8IZH2 RN7SL471P-201ENST00000580476 299 ntBASIC29.44■■■□□ 2.3
XRN1Q8IZH2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC29.44■■■□□ 2.3
XRN1Q8IZH2 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
XRN1Q8IZH2 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
XRN1Q8IZH2 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
XRN1Q8IZH2 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC29.43■■■□□ 2.3
XRN1Q8IZH2 AC105020.6-201ENST00000621523 1217 ntBASIC29.43■■■□□ 2.3
XRN1Q8IZH2 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC29.43■■■□□ 2.3
XRN1Q8IZH2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC29.43■■■□□ 2.3
XRN1Q8IZH2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC29.43■■■□□ 2.3
XRN1Q8IZH2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
XRN1Q8IZH2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC29.43■■■□□ 2.3
XRN1Q8IZH2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC29.43■■■□□ 2.3
XRN1Q8IZH2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC29.43■■■□□ 2.3
XRN1Q8IZH2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
XRN1Q8IZH2 POM121L13P-201ENST00000422362 380 ntBASIC29.42■■■□□ 2.3
XRN1Q8IZH2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
XRN1Q8IZH2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
XRN1Q8IZH2 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC29.42■■■□□ 2.3
XRN1Q8IZH2 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
XRN1Q8IZH2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
XRN1Q8IZH2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
XRN1Q8IZH2 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC29.42■■■□□ 2.3
XRN1Q8IZH2 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC29.42■■■□□ 2.3
XRN1Q8IZH2 AC010331.1-201ENST00000611423 582 ntBASIC29.42■■■□□ 2.3
XRN1Q8IZH2 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC29.42■■■□□ 2.3
XRN1Q8IZH2 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC29.42■■■□□ 2.3
XRN1Q8IZH2 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
XRN1Q8IZH2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
XRN1Q8IZH2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
XRN1Q8IZH2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
XRN1Q8IZH2 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
XRN1Q8IZH2 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
XRN1Q8IZH2 SAPCD2P1-201ENST00000395413 1184 ntBASIC29.41■■■□□ 2.3
XRN1Q8IZH2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC29.41■■■□□ 2.3
XRN1Q8IZH2 CDV3P1-201ENST00000471403 739 ntBASIC29.41■■■□□ 2.3
XRN1Q8IZH2 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
XRN1Q8IZH2 BX088651.1-201ENST00000540551 451 ntBASIC29.41■■■□□ 2.3
XRN1Q8IZH2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
XRN1Q8IZH2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC29.41■■■□□ 2.3
XRN1Q8IZH2 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
XRN1Q8IZH2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
XRN1Q8IZH2 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
XRN1Q8IZH2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC29.4■■■□□ 2.3
XRN1Q8IZH2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC29.4■■■□□ 2.3
XRN1Q8IZH2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC29.4■■■□□ 2.3
XRN1Q8IZH2 OR2A1-AS1-207ENST00000486094 819 ntBASIC29.4■■■□□ 2.3
XRN1Q8IZH2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
XRN1Q8IZH2 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
XRN1Q8IZH2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
XRN1Q8IZH2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
XRN1Q8IZH2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC29.4■■■□□ 2.3
XRN1Q8IZH2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
XRN1Q8IZH2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC29.4■■■□□ 2.3
XRN1Q8IZH2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
XRN1Q8IZH2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC29.4■■■□□ 2.3
XRN1Q8IZH2 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC29.4■■■□□ 2.3
XRN1Q8IZH2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC29.4■■■□□ 2.3
XRN1Q8IZH2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
XRN1Q8IZH2 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
XRN1Q8IZH2 MIR1224-201ENST00000408193 85 ntBASIC29.39■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms