Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHPFQ8IZ52 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHPFQ8IZ52 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CHPFQ8IZ52 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHPFQ8IZ52 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHPFQ8IZ52 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHPFQ8IZ52 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CHPFQ8IZ52 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.36■■□□□ 1.01
CHPFQ8IZ52 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHPFQ8IZ52 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHPFQ8IZ52 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CHPFQ8IZ52 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.36■■□□□ 1.01
CHPFQ8IZ52 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CHPFQ8IZ52 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHPFQ8IZ52 MIR4651-201ENST00000582622 73 ntBASIC21.36■■□□□ 1.01
CHPFQ8IZ52 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.36■■□□□ 1.01
CHPFQ8IZ52 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CHPFQ8IZ52 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.36■■□□□ 1.01
CHPFQ8IZ52 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CHPFQ8IZ52 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHPFQ8IZ52 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHPFQ8IZ52 C1orf229-201ENST00000623686 2258 ntBASIC21.36■■□□□ 1.01
CHPFQ8IZ52 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHPFQ8IZ52 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
CHPFQ8IZ52 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CHPFQ8IZ52 EP400NL-214ENST00000641289 2402 ntBASIC21.36■■□□□ 1.01
CHPFQ8IZ52 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
CHPFQ8IZ52 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHPFQ8IZ52 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHPFQ8IZ52 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHPFQ8IZ52 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHPFQ8IZ52 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.35■■□□□ 1.01
CHPFQ8IZ52 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.35■■□□□ 1.01
CHPFQ8IZ52 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHPFQ8IZ52 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CHPFQ8IZ52 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.35■■□□□ 1.01
CHPFQ8IZ52 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.35■■□□□ 1.01
CHPFQ8IZ52 FAM201B-201ENST00000458407 597 ntBASIC21.35■■□□□ 1.01
CHPFQ8IZ52 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHPFQ8IZ52 AL591742.1-201ENST00000604433 565 ntBASIC21.35■■□□□ 1.01
CHPFQ8IZ52 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHPFQ8IZ52 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHPFQ8IZ52 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CHPFQ8IZ52 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.35■■□□□ 1.01
CHPFQ8IZ52 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CHPFQ8IZ52 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CHPFQ8IZ52 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHPFQ8IZ52 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CHPFQ8IZ52 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.34■■□□□ 1.01
CHPFQ8IZ52 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.34■■□□□ 1.01
CHPFQ8IZ52 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.34■■□□□ 1.01
CHPFQ8IZ52 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHPFQ8IZ52 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.34■■□□□ 1.01
CHPFQ8IZ52 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CHPFQ8IZ52 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHPFQ8IZ52 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHPFQ8IZ52 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.34■■□□□ 1.01
CHPFQ8IZ52 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHPFQ8IZ52 AC233723.2-201ENST00000623798 2106 ntBASIC21.34■■□□□ 1.01
CHPFQ8IZ52 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
CHPFQ8IZ52 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.33■■□□□ 1.01
CHPFQ8IZ52 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.33■■□□□ 1.01
CHPFQ8IZ52 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHPFQ8IZ52 BX276092.2-201ENST00000417668 665 ntBASIC21.33■■□□□ 1.01
CHPFQ8IZ52 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.33■■□□□ 1.01
CHPFQ8IZ52 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.33■■□□□ 1.01
CHPFQ8IZ52 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.33■■□□□ 1.01
CHPFQ8IZ52 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CHPFQ8IZ52 AC080038.3-201ENST00000623346 1952 ntBASIC21.33■■□□□ 1.01
CHPFQ8IZ52 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.33■■□□□ 1
CHPFQ8IZ52 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
CHPFQ8IZ52 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.33■■□□□ 1
CHPFQ8IZ52 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHPFQ8IZ52 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CHPFQ8IZ52 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHPFQ8IZ52 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHPFQ8IZ52 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHPFQ8IZ52 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CHPFQ8IZ52 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.32■■□□□ 1
CHPFQ8IZ52 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHPFQ8IZ52 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.32■■□□□ 1
CHPFQ8IZ52 RNA5SP413-201ENST00000516373 109 ntBASIC21.32■■□□□ 1
CHPFQ8IZ52 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.32■■□□□ 1
CHPFQ8IZ52 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.32■■□□□ 1
CHPFQ8IZ52 AC243732.1-201ENST00000612648 864 ntBASIC21.32■■□□□ 1
CHPFQ8IZ52 AC092118.2-201ENST00000613495 667 ntBASIC21.32■■□□□ 1
CHPFQ8IZ52 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHPFQ8IZ52 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHPFQ8IZ52 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CHPFQ8IZ52 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CHPFQ8IZ52 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHPFQ8IZ52 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.31■■□□□ 1
CHPFQ8IZ52 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.31■■□□□ 1
CHPFQ8IZ52 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHPFQ8IZ52 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHPFQ8IZ52 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHPFQ8IZ52 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CHPFQ8IZ52 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
CHPFQ8IZ52 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.31■■□□□ 1
CHPFQ8IZ52 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms