Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SLX4Q8IY92 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC25.84■■□□□ 1.73
SLX4Q8IY92 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SLX4Q8IY92 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SLX4Q8IY92 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SLX4Q8IY92 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
SLX4Q8IY92 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SLX4Q8IY92 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC25.84■■□□□ 1.73
SLX4Q8IY92 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC25.84■■□□□ 1.73
SLX4Q8IY92 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
SLX4Q8IY92 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC25.84■■□□□ 1.73
SLX4Q8IY92 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SLX4Q8IY92 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SLX4Q8IY92 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SLX4Q8IY92 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SLX4Q8IY92 MCRIP2P1-201ENST00000394346 511 ntBASIC25.83■■□□□ 1.73
SLX4Q8IY92 AC012618.2-201ENST00000428058 849 ntBASIC25.83■■□□□ 1.73
SLX4Q8IY92 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC25.83■■□□□ 1.72
SLX4Q8IY92 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
SLX4Q8IY92 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC25.83■■□□□ 1.72
SLX4Q8IY92 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
SLX4Q8IY92 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SLX4Q8IY92 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC25.82■■□□□ 1.72
SLX4Q8IY92 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
SLX4Q8IY92 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SLX4Q8IY92 SOX15-203ENST00000570788 1093 ntBASIC25.82■■□□□ 1.72
SLX4Q8IY92 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC25.82■■□□□ 1.72
SLX4Q8IY92 LINC01023-201ENST00000606054 436 ntBASIC25.82■■□□□ 1.72
SLX4Q8IY92 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC25.82■■□□□ 1.72
SLX4Q8IY92 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SLX4Q8IY92 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
SLX4Q8IY92 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SLX4Q8IY92 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SLX4Q8IY92 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC25.81■■□□□ 1.72
SLX4Q8IY92 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SLX4Q8IY92 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC25.81■■□□□ 1.72
SLX4Q8IY92 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SLX4Q8IY92 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC25.81■■□□□ 1.72
SLX4Q8IY92 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC25.81■■□□□ 1.72
SLX4Q8IY92 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SLX4Q8IY92 GCA-201ENST00000233612 1694 ntTSL 2 BASIC25.81■■□□□ 1.72
SLX4Q8IY92 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SLX4Q8IY92 AC211429.1-201ENST00000415277 523 ntBASIC25.81■■□□□ 1.72
SLX4Q8IY92 VMO1-204ENST00000441199 741 ntTSL 2 BASIC25.81■■□□□ 1.72
SLX4Q8IY92 REXO2-216ENST00000544196 452 ntTSL 3 BASIC25.81■■□□□ 1.72
SLX4Q8IY92 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC25.81■■□□□ 1.72
SLX4Q8IY92 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SLX4Q8IY92 SPIB-206ENST00000596074 847 ntTSL 2 BASIC25.81■■□□□ 1.72
SLX4Q8IY92 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SLX4Q8IY92 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC25.81■■□□□ 1.72
SLX4Q8IY92 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
SLX4Q8IY92 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SLX4Q8IY92 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SLX4Q8IY92 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SLX4Q8IY92 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SLX4Q8IY92 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC25.8■■□□□ 1.72
SLX4Q8IY92 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SLX4Q8IY92 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC25.8■■□□□ 1.72
SLX4Q8IY92 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC25.8■■□□□ 1.72
SLX4Q8IY92 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC25.8■■□□□ 1.72
SLX4Q8IY92 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SLX4Q8IY92 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
SLX4Q8IY92 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
SLX4Q8IY92 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SLX4Q8IY92 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SLX4Q8IY92 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
SLX4Q8IY92 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SLX4Q8IY92 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC25.79■■□□□ 1.72
SLX4Q8IY92 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SLX4Q8IY92 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SLX4Q8IY92 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SLX4Q8IY92 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SLX4Q8IY92 POM121L13P-201ENST00000422362 380 ntBASIC25.79■■□□□ 1.72
SLX4Q8IY92 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC25.79■■□□□ 1.72
SLX4Q8IY92 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
SLX4Q8IY92 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC25.79■■□□□ 1.72
SLX4Q8IY92 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SLX4Q8IY92 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SLX4Q8IY92 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SLX4Q8IY92 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC25.78■■□□□ 1.72
SLX4Q8IY92 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SLX4Q8IY92 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
SLX4Q8IY92 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
SLX4Q8IY92 FAM210CP-201ENST00000445714 574 ntBASIC25.78■■□□□ 1.72
SLX4Q8IY92 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC25.78■■□□□ 1.72
SLX4Q8IY92 RN7SL471P-201ENST00000580476 299 ntBASIC25.78■■□□□ 1.72
SLX4Q8IY92 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC25.78■■□□□ 1.72
SLX4Q8IY92 AC010331.1-201ENST00000611423 582 ntBASIC25.78■■□□□ 1.72
SLX4Q8IY92 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.78■■□□□ 1.72
SLX4Q8IY92 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
SLX4Q8IY92 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SLX4Q8IY92 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SLX4Q8IY92 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
SLX4Q8IY92 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
SLX4Q8IY92 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
SLX4Q8IY92 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC25.77■■□□□ 1.72
SLX4Q8IY92 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SLX4Q8IY92 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC25.77■■□□□ 1.72
SLX4Q8IY92 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC25.77■■□□□ 1.72
SLX4Q8IY92 OR2A1-AS1-207ENST00000486094 819 ntBASIC25.77■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms