Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF135Q8IUD6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.21■■□□□ 1.15
RNF135Q8IUD6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC22.21■■□□□ 1.15
RNF135Q8IUD6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22.21■■□□□ 1.15
RNF135Q8IUD6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC22.21■■□□□ 1.15
RNF135Q8IUD6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.21■■□□□ 1.15
RNF135Q8IUD6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
RNF135Q8IUD6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.21■■□□□ 1.15
RNF135Q8IUD6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RNF135Q8IUD6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF135Q8IUD6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.21■■□□□ 1.15
RNF135Q8IUD6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.21■■□□□ 1.15
RNF135Q8IUD6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF135Q8IUD6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF135Q8IUD6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF135Q8IUD6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
RNF135Q8IUD6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.2■■□□□ 1.14
RNF135Q8IUD6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF135Q8IUD6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.2■■□□□ 1.14
RNF135Q8IUD6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF135Q8IUD6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RNF135Q8IUD6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC22.2■■□□□ 1.14
RNF135Q8IUD6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF135Q8IUD6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF135Q8IUD6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.2■■□□□ 1.14
RNF135Q8IUD6 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF135Q8IUD6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF135Q8IUD6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF135Q8IUD6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
RNF135Q8IUD6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF135Q8IUD6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF135Q8IUD6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF135Q8IUD6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC22.19■■□□□ 1.14
RNF135Q8IUD6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF135Q8IUD6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF135Q8IUD6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC22.19■■□□□ 1.14
RNF135Q8IUD6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF135Q8IUD6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF135Q8IUD6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF135Q8IUD6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
RNF135Q8IUD6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF135Q8IUD6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC22.18■■□□□ 1.14
RNF135Q8IUD6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
RNF135Q8IUD6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF135Q8IUD6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
RNF135Q8IUD6 GXYLT1P3-201ENST00000453058 1193 ntBASIC22.18■■□□□ 1.14
RNF135Q8IUD6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF135Q8IUD6 UNC93B5-201ENST00000530315 699 ntBASIC22.18■■□□□ 1.14
RNF135Q8IUD6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RNF135Q8IUD6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF135Q8IUD6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.18■■□□□ 1.14
RNF135Q8IUD6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
RNF135Q8IUD6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.17■■□□□ 1.14
RNF135Q8IUD6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF135Q8IUD6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF135Q8IUD6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.17■■□□□ 1.14
RNF135Q8IUD6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF135Q8IUD6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF135Q8IUD6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
RNF135Q8IUD6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RNF135Q8IUD6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.17■■□□□ 1.14
RNF135Q8IUD6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF135Q8IUD6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RNF135Q8IUD6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF135Q8IUD6 AP003097.1-201ENST00000530657 1135 ntBASIC22.17■■□□□ 1.14
RNF135Q8IUD6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC22.17■■□□□ 1.14
RNF135Q8IUD6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.17■■□□□ 1.14
RNF135Q8IUD6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC22.17■■□□□ 1.14
RNF135Q8IUD6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF135Q8IUD6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF135Q8IUD6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
RNF135Q8IUD6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF135Q8IUD6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RNF135Q8IUD6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
RNF135Q8IUD6 AC079834.2-201ENST00000609776 1949 ntBASIC22.16■■□□□ 1.14
RNF135Q8IUD6 AL117328.2-201ENST00000624617 1940 ntBASIC22.16■■□□□ 1.14
RNF135Q8IUD6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
RNF135Q8IUD6 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF135Q8IUD6 MIR718-201ENST00000390190 70 ntBASIC22.16■■□□□ 1.14
RNF135Q8IUD6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RNF135Q8IUD6 AC211429.1-201ENST00000415277 523 ntBASIC22.16■■□□□ 1.14
RNF135Q8IUD6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC22.16■■□□□ 1.14
RNF135Q8IUD6 MAX-217ENST00000557277 728 ntTSL 3 BASIC22.16■■□□□ 1.14
RNF135Q8IUD6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.16■■□□□ 1.14
RNF135Q8IUD6 AL359736.2-201ENST00000621992 437 ntBASIC22.16■■□□□ 1.14
RNF135Q8IUD6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF135Q8IUD6 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RNF135Q8IUD6 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.15■■□□□ 1.14
RNF135Q8IUD6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF135Q8IUD6 AC087742.1-201ENST00000575880 1738 ntBASIC22.15■■□□□ 1.14
RNF135Q8IUD6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF135Q8IUD6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF135Q8IUD6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC22.15■■□□□ 1.14
RNF135Q8IUD6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RNF135Q8IUD6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC22.15■■□□□ 1.14
RNF135Q8IUD6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RNF135Q8IUD6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC22.15■■□□□ 1.14
RNF135Q8IUD6 MIR4497-201ENST00000583208 89 ntBASIC22.15■■□□□ 1.14
RNF135Q8IUD6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF135Q8IUD6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms