Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VRK2Q86Y07 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VRK2Q86Y07 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.37■□□□□ 0.69
VRK2Q86Y07 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VRK2Q86Y07 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
VRK2Q86Y07 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VRK2Q86Y07 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
VRK2Q86Y07 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
VRK2Q86Y07 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.37■□□□□ 0.69
VRK2Q86Y07 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.37■□□□□ 0.69
VRK2Q86Y07 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.37■□□□□ 0.69
VRK2Q86Y07 AL354811.1-201ENST00000610286 706 ntBASIC19.37■□□□□ 0.69
VRK2Q86Y07 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.37■□□□□ 0.69
VRK2Q86Y07 AC005837.3-201ENST00000612163 286 ntBASIC19.37■□□□□ 0.69
VRK2Q86Y07 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.37■□□□□ 0.69
VRK2Q86Y07 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VRK2Q86Y07 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.37■□□□□ 0.69
VRK2Q86Y07 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VRK2Q86Y07 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VRK2Q86Y07 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VRK2Q86Y07 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.37■□□□□ 0.69
VRK2Q86Y07 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VRK2Q86Y07 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VRK2Q86Y07 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VRK2Q86Y07 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
VRK2Q86Y07 AL157384.1-201ENST00000445995 2473 ntBASIC19.36■□□□□ 0.69
VRK2Q86Y07 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VRK2Q86Y07 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
VRK2Q86Y07 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
VRK2Q86Y07 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
VRK2Q86Y07 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
VRK2Q86Y07 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.36■□□□□ 0.69
VRK2Q86Y07 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
VRK2Q86Y07 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VRK2Q86Y07 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.36■□□□□ 0.69
VRK2Q86Y07 TPRG1LP1-201ENST00000598702 760 ntBASIC19.36■□□□□ 0.69
VRK2Q86Y07 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
VRK2Q86Y07 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
VRK2Q86Y07 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VRK2Q86Y07 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VRK2Q86Y07 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VRK2Q86Y07 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VRK2Q86Y07 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VRK2Q86Y07 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VRK2Q86Y07 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VRK2Q86Y07 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
VRK2Q86Y07 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VRK2Q86Y07 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VRK2Q86Y07 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.35■□□□□ 0.69
VRK2Q86Y07 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.35■□□□□ 0.69
VRK2Q86Y07 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.35■□□□□ 0.69
VRK2Q86Y07 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VRK2Q86Y07 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VRK2Q86Y07 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
VRK2Q86Y07 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
VRK2Q86Y07 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VRK2Q86Y07 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
VRK2Q86Y07 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
VRK2Q86Y07 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VRK2Q86Y07 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VRK2Q86Y07 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.34■□□□□ 0.69
VRK2Q86Y07 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.34■□□□□ 0.69
VRK2Q86Y07 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VRK2Q86Y07 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VRK2Q86Y07 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.34■□□□□ 0.69
VRK2Q86Y07 AC105265.2-201ENST00000467189 838 ntBASIC19.34■□□□□ 0.69
VRK2Q86Y07 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VRK2Q86Y07 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VRK2Q86Y07 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VRK2Q86Y07 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
VRK2Q86Y07 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.33■□□□□ 0.69
VRK2Q86Y07 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
VRK2Q86Y07 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VRK2Q86Y07 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
VRK2Q86Y07 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.33■□□□□ 0.69
VRK2Q86Y07 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VRK2Q86Y07 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
VRK2Q86Y07 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.33■□□□□ 0.68
VRK2Q86Y07 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.68
VRK2Q86Y07 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VRK2Q86Y07 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.33■□□□□ 0.68
VRK2Q86Y07 AL358852.1-201ENST00000623174 1268 ntBASIC19.33■□□□□ 0.68
VRK2Q86Y07 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VRK2Q86Y07 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.33■□□□□ 0.68
VRK2Q86Y07 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VRK2Q86Y07 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VRK2Q86Y07 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.33■□□□□ 0.68
VRK2Q86Y07 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VRK2Q86Y07 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VRK2Q86Y07 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
VRK2Q86Y07 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
VRK2Q86Y07 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VRK2Q86Y07 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.33■□□□□ 0.68
VRK2Q86Y07 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.33■□□□□ 0.68
VRK2Q86Y07 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VRK2Q86Y07 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
VRK2Q86Y07 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VRK2Q86Y07 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VRK2Q86Y07 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.32■□□□□ 0.68
VRK2Q86Y07 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms