Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 ECH1-211ENST00000598707 882 ntTSL 215.66■□□□□ 0.14e-6■■■□□ 18.9
LARP4Q71RC2 ECH1-213ENST00000601060 786 ntTSL 314.39□□□□□ -0.114e-6■■■□□ 18.9
LARP4Q71RC2 ECH1-216ENST00000601778 799 ntTSL 513.23□□□□□ -0.294e-6■■■□□ 18.9
LARP4Q71RC2 ECH1-202ENST00000594164 677 ntTSL 311.54□□□□□ -0.564e-6■■■□□ 18.9
LARP4Q71RC2 RPL30-210ENST00000521534 573 ntTSL 24.97□□□□□ -1.615e-16■■■□□ 18.9
LARP4Q71RC2 DAD1-202ENST00000489532 339 ntTSL 34.27□□□□□ -1.733e-28■■■□□ 18.9
LARP4Q71RC2 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.293e-8■■■□□ 18.9
LARP4Q71RC2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.85■■□□□ 1.253e-8■■■□□ 18.9
LARP4Q71RC2 SLC35B2-203ENST00000495706 1859 ntTSL 322.19■■□□□ 1.143e-8■■■□□ 18.9
LARP4Q71RC2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.19■■□□□ 1.143e-8■■■□□ 18.9
LARP4Q71RC2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.41■□□□□ 0.543e-8■■■□□ 18.9
LARP4Q71RC2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.3■□□□□ 0.523e-8■■■□□ 18.9
LARP4Q71RC2 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.74□□□□□ -0.213e-8■■■□□ 18.9
LARP4Q71RC2 PDIA3-202ENST00000434494 2107 ntTSL 214.44□□□□□ -0.14e-13■■■□□ 18.9
LARP4Q71RC2 HAX1-202ENST00000435087 822 ntTSL 311.66□□□□□ -0.541e-7■■■□□ 18.9
LARP4Q71RC2 PDIA3-201ENST00000300289 3727 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.674e-13■■■□□ 18.9
LARP4Q71RC2 HAX1-206ENST00000471326 1170 ntTSL 210.65□□□□□ -0.71e-7■■■□□ 18.9
LARP4Q71RC2 HAX1-207ENST00000477780 1089 ntTSL 29.43□□□□□ -0.91e-7■■■□□ 18.9
LARP4Q71RC2 PDIA3-206ENST00000497349 739 ntTSL 26.76□□□□□ -1.333e-13■■■□□ 18.9
LARP4Q71RC2 XRCC5-209ENST00000485763 616 ntTSL 26.38□□□□□ -1.395e-17■■■□□ 18.9
LARP4Q71RC2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.129e-7■■■□□ 18.9
LARP4Q71RC2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.829e-7■■■□□ 18.9
LARP4Q71RC2 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC12.71□□□□□ -0.379e-7■■■□□ 18.9
LARP4Q71RC2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.075e-14■■■□□ 18.9
LARP4Q71RC2 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.18□□□□□ -0.145e-14■■■□□ 18.9
LARP4Q71RC2 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC12.01□□□□□ -0.495e-14■■■□□ 18.9
LARP4Q71RC2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.42■■□□□ 1.188e-10■■■□□ 18.9
LARP4Q71RC2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 18e-10■■■□□ 18.9
LARP4Q71RC2 TRIM28-213ENST00000598355 714 ntTSL 214.77□□□□□ -0.058e-10■■■□□ 18.9
LARP4Q71RC2 TRIM28-207ENST00000597136 1552 ntTSL 214.21□□□□□ -0.148e-10■■■□□ 18.9
LARP4Q71RC2 GRINA-204ENST00000527194 806 ntTSL 213.56□□□□□ -0.242e-8■■■□□ 18.9
LARP4Q71RC2 EIF4G1-230ENST00000460829 1804 ntTSL 219.55■□□□□ 0.724e-10■■■□□ 18.8
LARP4Q71RC2 PSME2-203ENST00000558273 1502 ntTSL 214.11□□□□□ -0.151e-9■■■□□ 18.8
LARP4Q71RC2 PSME2-204ENST00000558931 2754 ntTSL 514□□□□□ -0.171e-9■■■□□ 18.8
LARP4Q71RC2 PSME2-206ENST00000559042 643 nt13.01□□□□□ -0.331e-9■■■□□ 18.8
LARP4Q71RC2 PSME2-202ENST00000471700 706 ntTSL 312.87□□□□□ -0.351e-9■■■□□ 18.8
LARP4Q71RC2 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.451e-9■■■□□ 18.8
LARP4Q71RC2 PSME2-213ENST00000560410 755 ntTSL 3 BASIC10.9□□□□□ -0.661e-9■■■□□ 18.8
LARP4Q71RC2 PSME2-217ENST00000615264 874 ntTSL 5 BASIC10.63□□□□□ -0.711e-9■■■□□ 18.8
LARP4Q71RC2 PSME2-209ENST00000559453 1721 ntTSL 510.33□□□□□ -0.761e-9■■■□□ 18.8
LARP4Q71RC2 PSME2-205ENST00000559005 496 ntTSL 28.46□□□□□ -1.061e-9■■■□□ 18.8
LARP4Q71RC2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.126e-8■■■□□ 18.8
LARP4Q71RC2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.655e-12■■■□□ 18.8
LARP4Q71RC2 TM4SF5-202ENST00000576530 932 ntTSL 1 (best)17.15■□□□□ 0.345e-12■■■□□ 18.8
LARP4Q71RC2 HUWE1-202ENST00000262854 14739 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.825e-6■■■□□ 18.8
LARP4Q71RC2 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.375e-6■■■□□ 18.8
LARP4Q71RC2 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.36□□□□□ -1.555e-6■■■□□ 18.8
LARP4Q71RC2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.381e-12■■■□□ 18.8
LARP4Q71RC2 CYSTM1-204ENST00000509789 813 ntTSL 413.18□□□□□ -0.31e-12■■■□□ 18.8
LARP4Q71RC2 CYSTM1-202ENST00000504227 588 ntTSL 513.18□□□□□ -0.31e-12■■■□□ 18.8
LARP4Q71RC2 CYSTM1-203ENST00000509589 665 ntTSL 39.27□□□□□ -0.931e-12■■■□□ 18.8
LARP4Q71RC2 LGALS1-202ENST00000425542 637 ntTSL 316.68■□□□□ 0.261e-7■■■□□ 18.8
LARP4Q71RC2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.081e-7■■■□□ 18.8
LARP4Q71RC2 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.083e-12■■■□□ 18.8
LARP4Q71RC2 PIGU-201ENST00000217446 1632 ntAPPRIS P2 TSL 1 (best)14.96□□□□□ -0.013e-12■■■□□ 18.8
LARP4Q71RC2 AKAP9-216ENST00000619023 6006 ntTSL 5 BASIC10.93□□□□□ -0.661e-8■■■□□ 18.8
LARP4Q71RC2 AKAP9-214ENST00000493453 6020 ntTSL 28.93□□□□□ -0.981e-8■■■□□ 18.8
LARP4Q71RC2 AL365205.1-201ENST00000456057 3947 ntTSL 216.12■□□□□ 0.172e-9■■■□□ 18.8
LARP4Q71RC2 AL365205.1-203ENST00000335515 2871 ntTSL 213.85□□□□□ -0.192e-9■■■□□ 18.8
LARP4Q71RC2 AL365205.1-202ENST00000487182 3043 ntTSL 212.62□□□□□ -0.392e-9■■■□□ 18.8
LARP4Q71RC2 TOMM6-201ENST00000398881 595 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.222e-9■■■□□ 18.8
LARP4Q71RC2 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.482e-9■■■□□ 18.8
LARP4Q71RC2 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.241e-6■■■□□ 18.8
LARP4Q71RC2 PGLS-203ENST00000595782 651 ntTSL 316.55■□□□□ 0.241e-6■■■□□ 18.8
LARP4Q71RC2 NDUFA4-203ENST00000470761 502 ntTSL 413.62□□□□□ -0.238e-7■■■□□ 18.8
LARP4Q71RC2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.565e-11■■■□□ 18.8
LARP4Q71RC2 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.175e-11■■■□□ 18.8
LARP4Q71RC2 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.355e-11■■■□□ 18.8
LARP4Q71RC2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.51e-6■■■□□ 18.7
LARP4Q71RC2 TAP1-202ENST00000486332 2542 ntTSL 211.63□□□□□ -0.551e-6■■■□□ 18.7
LARP4Q71RC2 MESD-204ENST00000560189 936 ntTSL 58.81□□□□□ -15e-8■■■□□ 18.7
LARP4Q71RC2 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.148e-12■■■□□ 18.7
LARP4Q71RC2 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.325e-8■■■□□ 18.7
LARP4Q71RC2 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.345e-8■■■□□ 18.7
LARP4Q71RC2 CD320-205ENST00000598299 577 ntTSL 218.92■□□□□ 0.622e-8■■■□□ 18.7
LARP4Q71RC2 ANP32E-204ENST00000532744 621 ntTSL 315.21■□□□□ 0.033e-9■■■□□ 18.7
LARP4Q71RC2 PRRC2C-208ENST00000476522 1931 ntTSL 512.24□□□□□ -0.453e-9■■■□□ 18.7
LARP4Q71RC2 PRRC2C-203ENST00000392078 1919 ntTSL 1 (best) BASIC9.47□□□□□ -0.893e-9■■■□□ 18.7
LARP4Q71RC2 NPC2-206ENST00000555592 469 ntTSL 516.26■□□□□ 0.197e-8■■■□□ 18.7
LARP4Q71RC2 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.464e-7■■■□□ 18.7
LARP4Q71RC2 AC079781.5-201ENST00000641390 3211 nt18.32■□□□□ 0.528e-34■■■□□ 18.7
LARP4Q71RC2 AC079781.5-203ENST00000641315 2059 nt18■□□□□ 0.478e-34■■■□□ 18.7
LARP4Q71RC2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.83■□□□□ 0.448e-34■■■□□ 18.7
LARP4Q71RC2 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.158e-34■■■□□ 18.7
LARP4Q71RC2 AC079781.5-202ENST00000641784 3743 ntBASIC14.39□□□□□ -0.118e-34■■■□□ 18.7
LARP4Q71RC2 ASNS-203ENST00000394309 2289 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.738e-34■■■□□ 18.7
LARP4Q71RC2 ASNS-202ENST00000394308 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.798e-34■■■□□ 18.7
LARP4Q71RC2 ASNS-205ENST00000422745 1865 ntTSL 5 BASIC9.54□□□□□ -0.888e-34■■■□□ 18.7
LARP4Q71RC2 ASNS-213ENST00000454046 1947 ntTSL 58.06□□□□□ -1.128e-34■■■□□ 18.7
LARP4Q71RC2 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC6.65□□□□□ -1.348e-34■■■□□ 18.7
LARP4Q71RC2 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.33□□□□□ -1.48e-34■■■□□ 18.7
LARP4Q71RC2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.29■■□□□ 1.481e-6■■■□□ 18.7
LARP4Q71RC2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.49■□□□□ 0.711e-6■■■□□ 18.7
LARP4Q71RC2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.55■□□□□ 0.561e-6■■■□□ 18.7
LARP4Q71RC2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.45■□□□□ 0.541e-6■■■□□ 18.7
LARP4Q71RC2 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.51e-6■■■□□ 18.7
LARP4Q71RC2 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.06■□□□□ 0.321e-6■■■□□ 18.7
LARP4Q71RC2 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.321e-6■■■□□ 18.7
LARP4Q71RC2 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.09□□□□□ -0.151e-6■■■□□ 18.7
LARP4Q71RC2 SLC25A39-215ENST00000592372 867 ntTSL 315.43■□□□□ 0.069e-7■■■□□ 18.7
Retrieved 100 of 15,922 protein–RNA pairs in 150.8 ms