Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
GDPD4Q6W3E5 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GDPD4Q6W3E5 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GDPD4Q6W3E5 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
GDPD4Q6W3E5 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.09■□□□□ 0.97
GDPD4Q6W3E5 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GDPD4Q6W3E5 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.09■□□□□ 0.97
GDPD4Q6W3E5 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
GDPD4Q6W3E5 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GDPD4Q6W3E5 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.09■□□□□ 0.97
GDPD4Q6W3E5 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GDPD4Q6W3E5 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
GDPD4Q6W3E5 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GDPD4Q6W3E5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.09■□□□□ 0.97
GDPD4Q6W3E5 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
GDPD4Q6W3E5 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.08■□□□□ 0.97
GDPD4Q6W3E5 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.08■□□□□ 0.97
GDPD4Q6W3E5 AC007322.4-201ENST00000509611 723 ntBASIC21.08■□□□□ 0.97
GDPD4Q6W3E5 AC243732.1-201ENST00000612648 864 ntBASIC21.08■□□□□ 0.97
GDPD4Q6W3E5 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
GDPD4Q6W3E5 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
GDPD4Q6W3E5 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
GDPD4Q6W3E5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
GDPD4Q6W3E5 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.08■□□□□ 0.96
GDPD4Q6W3E5 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
GDPD4Q6W3E5 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.08■□□□□ 0.96
GDPD4Q6W3E5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.07■□□□□ 0.96
GDPD4Q6W3E5 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.07■□□□□ 0.96
GDPD4Q6W3E5 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.07■□□□□ 0.96
GDPD4Q6W3E5 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.07■□□□□ 0.96
GDPD4Q6W3E5 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GDPD4Q6W3E5 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GDPD4Q6W3E5 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GDPD4Q6W3E5 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.07■□□□□ 0.96
GDPD4Q6W3E5 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GDPD4Q6W3E5 FBXW4P1-201ENST00000426721 2239 ntBASIC21.06■□□□□ 0.96
GDPD4Q6W3E5 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.06■□□□□ 0.96
GDPD4Q6W3E5 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GDPD4Q6W3E5 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
GDPD4Q6W3E5 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
GDPD4Q6W3E5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GDPD4Q6W3E5 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
GDPD4Q6W3E5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.06■□□□□ 0.96
GDPD4Q6W3E5 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
GDPD4Q6W3E5 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GDPD4Q6W3E5 ID1-201ENST00000376105 1233 ntBASIC21.06■□□□□ 0.96
GDPD4Q6W3E5 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.06■□□□□ 0.96
GDPD4Q6W3E5 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.06■□□□□ 0.96
GDPD4Q6W3E5 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.06■□□□□ 0.96
GDPD4Q6W3E5 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.06■□□□□ 0.96
GDPD4Q6W3E5 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.06■□□□□ 0.96
GDPD4Q6W3E5 AL050303.2-201ENST00000619798 666 ntBASIC21.06■□□□□ 0.96
GDPD4Q6W3E5 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.06■□□□□ 0.96
GDPD4Q6W3E5 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
GDPD4Q6W3E5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.06■□□□□ 0.96
GDPD4Q6W3E5 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GDPD4Q6W3E5 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.05■□□□□ 0.96
GDPD4Q6W3E5 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GDPD4Q6W3E5 AC068338.2-201ENST00000563278 1430 ntBASIC21.05■□□□□ 0.96
GDPD4Q6W3E5 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GDPD4Q6W3E5 AC244015.2-201ENST00000616358 1861 ntBASIC21.05■□□□□ 0.96
GDPD4Q6W3E5 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GDPD4Q6W3E5 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GDPD4Q6W3E5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
GDPD4Q6W3E5 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GDPD4Q6W3E5 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GDPD4Q6W3E5 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GDPD4Q6W3E5 NCF1B-203ENST00000435988 1254 ntBASIC21.05■□□□□ 0.96
GDPD4Q6W3E5 AC245052.3-201ENST00000450182 901 ntBASIC21.05■□□□□ 0.96
GDPD4Q6W3E5 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.05■□□□□ 0.96
GDPD4Q6W3E5 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
GDPD4Q6W3E5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
GDPD4Q6W3E5 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
GDPD4Q6W3E5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GDPD4Q6W3E5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GDPD4Q6W3E5 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.04■□□□□ 0.96
GDPD4Q6W3E5 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GDPD4Q6W3E5 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GDPD4Q6W3E5 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
GDPD4Q6W3E5 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
GDPD4Q6W3E5 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GDPD4Q6W3E5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GDPD4Q6W3E5 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.04■□□□□ 0.96
GDPD4Q6W3E5 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GDPD4Q6W3E5 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GDPD4Q6W3E5 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GDPD4Q6W3E5 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.04■□□□□ 0.96
GDPD4Q6W3E5 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
GDPD4Q6W3E5 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GDPD4Q6W3E5 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GDPD4Q6W3E5 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GDPD4Q6W3E5 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GDPD4Q6W3E5 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GDPD4Q6W3E5 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
GDPD4Q6W3E5 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.03■□□□□ 0.96
GDPD4Q6W3E5 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GDPD4Q6W3E5 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GDPD4Q6W3E5 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.03■□□□□ 0.96
GDPD4Q6W3E5 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GDPD4Q6W3E5 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms