Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00575Q6W349 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00575Q6W349 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00575Q6W349 MIR6722-201ENST00000617286 78 ntBASIC13.27□□□□□ -0.29
LINC00575Q6W349 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00575Q6W349 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC13.27□□□□□ -0.29
LINC00575Q6W349 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00575Q6W349 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00575Q6W349 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC13.27□□□□□ -0.29
LINC00575Q6W349 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00575Q6W349 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00575Q6W349 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00575Q6W349 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
LINC00575Q6W349 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
LINC00575Q6W349 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00575Q6W349 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00575Q6W349 AC027702.1-201ENST00000563810 1770 ntBASIC13.27□□□□□ -0.29
LINC00575Q6W349 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00575Q6W349 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00575Q6W349 AC020907.5-201ENST00000624372 1936 ntBASIC13.27□□□□□ -0.29
LINC00575Q6W349 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
LINC00575Q6W349 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
LINC00575Q6W349 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00575Q6W349 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
LINC00575Q6W349 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00575Q6W349 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00575Q6W349 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00575Q6W349 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00575Q6W349 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00575Q6W349 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00575Q6W349 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
LINC00575Q6W349 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00575Q6W349 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00575Q6W349 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00575Q6W349 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00575Q6W349 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00575Q6W349 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
LINC00575Q6W349 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC00575Q6W349 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00575Q6W349 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00575Q6W349 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
LINC00575Q6W349 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC00575Q6W349 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC13.26□□□□□ -0.29
LINC00575Q6W349 SMG8-203ENST00000578922 2178 ntBASIC13.26□□□□□ -0.29
LINC00575Q6W349 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00575Q6W349 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC00575Q6W349 AL031602.1-201ENST00000633169 911 ntBASIC13.26□□□□□ -0.29
LINC00575Q6W349 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LINC00575Q6W349 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LINC00575Q6W349 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
LINC00575Q6W349 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00575Q6W349 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00575Q6W349 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00575Q6W349 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
LINC00575Q6W349 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00575Q6W349 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
LINC00575Q6W349 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00575Q6W349 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00575Q6W349 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
LINC00575Q6W349 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
LINC00575Q6W349 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC00575Q6W349 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
LINC00575Q6W349 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00575Q6W349 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00575Q6W349 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00575Q6W349 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00575Q6W349 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00575Q6W349 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00575Q6W349 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
LINC00575Q6W349 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00575Q6W349 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
LINC00575Q6W349 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00575Q6W349 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00575Q6W349 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00575Q6W349 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00575Q6W349 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
LINC00575Q6W349 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC00575Q6W349 STX6-204ENST00000542060 4809 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00575Q6W349 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00575Q6W349 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00575Q6W349 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00575Q6W349 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00575Q6W349 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00575Q6W349 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00575Q6W349 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00575Q6W349 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00575Q6W349 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00575Q6W349 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC13.24□□□□□ -0.29
LINC00575Q6W349 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00575Q6W349 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00575Q6W349 PVT1-219ENST00000523427 938 ntTSL 3 BASIC13.24□□□□□ -0.29
LINC00575Q6W349 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC13.24□□□□□ -0.29
LINC00575Q6W349 AL499627.2-201ENST00000606283 725 ntBASIC13.24□□□□□ -0.29
LINC00575Q6W349 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00575Q6W349 BX323043.1-201ENST00000641006 1765 ntBASIC13.24□□□□□ -0.29
LINC00575Q6W349 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00575Q6W349 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00575Q6W349 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00575Q6W349 PALM-207ENST00000590161 2137 ntTSL 4 BASIC13.24□□□□□ -0.29
LINC00575Q6W349 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms