Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
H3F3CQ6NXT2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.39■□□□□ 0.69
H3F3CQ6NXT2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
H3F3CQ6NXT2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
H3F3CQ6NXT2 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
H3F3CQ6NXT2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
H3F3CQ6NXT2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
H3F3CQ6NXT2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.38■□□□□ 0.69
H3F3CQ6NXT2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.38■□□□□ 0.69
H3F3CQ6NXT2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
H3F3CQ6NXT2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
H3F3CQ6NXT2 SLC29A4P1-201ENST00000398760 971 ntBASIC19.38■□□□□ 0.69
H3F3CQ6NXT2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.38■□□□□ 0.69
H3F3CQ6NXT2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
H3F3CQ6NXT2 AL512625.2-201ENST00000417533 625 ntBASIC19.38■□□□□ 0.69
H3F3CQ6NXT2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
H3F3CQ6NXT2 CYP2T1P-201ENST00000432607 1285 ntBASIC19.38■□□□□ 0.69
H3F3CQ6NXT2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
H3F3CQ6NXT2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.38■□□□□ 0.69
H3F3CQ6NXT2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.38■□□□□ 0.69
H3F3CQ6NXT2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
H3F3CQ6NXT2 AC105036.2-201ENST00000569468 176 ntBASIC19.38■□□□□ 0.69
H3F3CQ6NXT2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
H3F3CQ6NXT2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
H3F3CQ6NXT2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
H3F3CQ6NXT2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
H3F3CQ6NXT2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.37■□□□□ 0.69
H3F3CQ6NXT2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
H3F3CQ6NXT2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.37■□□□□ 0.69
H3F3CQ6NXT2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
H3F3CQ6NXT2 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.37■□□□□ 0.69
H3F3CQ6NXT2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
H3F3CQ6NXT2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
H3F3CQ6NXT2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
H3F3CQ6NXT2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.37■□□□□ 0.69
H3F3CQ6NXT2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
H3F3CQ6NXT2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.37■□□□□ 0.69
H3F3CQ6NXT2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
H3F3CQ6NXT2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
H3F3CQ6NXT2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.37■□□□□ 0.69
H3F3CQ6NXT2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
H3F3CQ6NXT2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
H3F3CQ6NXT2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
H3F3CQ6NXT2 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
H3F3CQ6NXT2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
H3F3CQ6NXT2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
H3F3CQ6NXT2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.36■□□□□ 0.69
H3F3CQ6NXT2 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.36■□□□□ 0.69
H3F3CQ6NXT2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.36■□□□□ 0.69
H3F3CQ6NXT2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.36■□□□□ 0.69
H3F3CQ6NXT2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
H3F3CQ6NXT2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
H3F3CQ6NXT2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.36■□□□□ 0.69
H3F3CQ6NXT2 AC073210.2-201ENST00000430369 194 ntBASIC19.36■□□□□ 0.69
H3F3CQ6NXT2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
H3F3CQ6NXT2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.36■□□□□ 0.69
H3F3CQ6NXT2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.36■□□□□ 0.69
H3F3CQ6NXT2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.36■□□□□ 0.69
H3F3CQ6NXT2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
H3F3CQ6NXT2 AL591742.1-201ENST00000604433 565 ntBASIC19.36■□□□□ 0.69
H3F3CQ6NXT2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.36■□□□□ 0.69
H3F3CQ6NXT2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
H3F3CQ6NXT2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
H3F3CQ6NXT2 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
H3F3CQ6NXT2 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
H3F3CQ6NXT2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
H3F3CQ6NXT2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.36■□□□□ 0.69
H3F3CQ6NXT2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
H3F3CQ6NXT2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.35■□□□□ 0.69
H3F3CQ6NXT2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
H3F3CQ6NXT2 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
H3F3CQ6NXT2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
H3F3CQ6NXT2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
H3F3CQ6NXT2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
H3F3CQ6NXT2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
H3F3CQ6NXT2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
H3F3CQ6NXT2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.35■□□□□ 0.69
H3F3CQ6NXT2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
H3F3CQ6NXT2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.35■□□□□ 0.69
H3F3CQ6NXT2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
H3F3CQ6NXT2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
H3F3CQ6NXT2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
H3F3CQ6NXT2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
H3F3CQ6NXT2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
H3F3CQ6NXT2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
H3F3CQ6NXT2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
H3F3CQ6NXT2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
H3F3CQ6NXT2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
H3F3CQ6NXT2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
H3F3CQ6NXT2 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
H3F3CQ6NXT2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
H3F3CQ6NXT2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
H3F3CQ6NXT2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.34■□□□□ 0.69
H3F3CQ6NXT2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
H3F3CQ6NXT2 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.34■□□□□ 0.69
H3F3CQ6NXT2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.34■□□□□ 0.69
H3F3CQ6NXT2 AL138781.1-201ENST00000566567 1274 ntBASIC19.34■□□□□ 0.69
H3F3CQ6NXT2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.34■□□□□ 0.69
H3F3CQ6NXT2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.34■□□□□ 0.69
H3F3CQ6NXT2 AC069236.1-201ENST00000604339 616 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms