Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LPCAT4Q643R3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LPCAT4Q643R3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.76■□□□□ 0.75
LPCAT4Q643R3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
LPCAT4Q643R3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LPCAT4Q643R3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.76■□□□□ 0.75
LPCAT4Q643R3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
LPCAT4Q643R3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LPCAT4Q643R3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LPCAT4Q643R3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LPCAT4Q643R3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
LPCAT4Q643R3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LPCAT4Q643R3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LPCAT4Q643R3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.76■□□□□ 0.75
LPCAT4Q643R3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
LPCAT4Q643R3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
LPCAT4Q643R3 KRT18P24-201ENST00000344739 1156 ntBASIC19.76■□□□□ 0.75
LPCAT4Q643R3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LPCAT4Q643R3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
LPCAT4Q643R3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LPCAT4Q643R3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LPCAT4Q643R3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
LPCAT4Q643R3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.76■□□□□ 0.75
LPCAT4Q643R3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.76■□□□□ 0.75
LPCAT4Q643R3 OR7E47P-201ENST00000546390 1422 ntBASIC19.76■□□□□ 0.75
LPCAT4Q643R3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LPCAT4Q643R3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
LPCAT4Q643R3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LPCAT4Q643R3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
LPCAT4Q643R3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.75■□□□□ 0.75
LPCAT4Q643R3 AL512408.1-201ENST00000569378 2000 ntBASIC19.75■□□□□ 0.75
LPCAT4Q643R3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
LPCAT4Q643R3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.75■□□□□ 0.75
LPCAT4Q643R3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LPCAT4Q643R3 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.75■□□□□ 0.75
LPCAT4Q643R3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.75■□□□□ 0.75
LPCAT4Q643R3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.75■□□□□ 0.75
LPCAT4Q643R3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
LPCAT4Q643R3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.75■□□□□ 0.75
LPCAT4Q643R3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.75■□□□□ 0.75
LPCAT4Q643R3 BX323043.1-201ENST00000641006 1765 ntBASIC19.75■□□□□ 0.75
LPCAT4Q643R3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LPCAT4Q643R3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LPCAT4Q643R3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LPCAT4Q643R3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LPCAT4Q643R3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LPCAT4Q643R3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
LPCAT4Q643R3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.74■□□□□ 0.75
LPCAT4Q643R3 AC129492.7-201ENST00000622992 756 ntBASIC19.74■□□□□ 0.75
LPCAT4Q643R3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
LPCAT4Q643R3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
LPCAT4Q643R3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
LPCAT4Q643R3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LPCAT4Q643R3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LPCAT4Q643R3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
LPCAT4Q643R3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.73■□□□□ 0.75
LPCAT4Q643R3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
LPCAT4Q643R3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LPCAT4Q643R3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LPCAT4Q643R3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.73■□□□□ 0.75
LPCAT4Q643R3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.73■□□□□ 0.75
LPCAT4Q643R3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LPCAT4Q643R3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LPCAT4Q643R3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.73■□□□□ 0.75
LPCAT4Q643R3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LPCAT4Q643R3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.73■□□□□ 0.75
LPCAT4Q643R3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LPCAT4Q643R3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.73■□□□□ 0.75
LPCAT4Q643R3 AL162377.1-201ENST00000618844 1793 ntBASIC19.72■□□□□ 0.75
LPCAT4Q643R3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.72■□□□□ 0.75
LPCAT4Q643R3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LPCAT4Q643R3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LPCAT4Q643R3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LPCAT4Q643R3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LPCAT4Q643R3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.72■□□□□ 0.75
LPCAT4Q643R3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LPCAT4Q643R3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LPCAT4Q643R3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.72■□□□□ 0.75
LPCAT4Q643R3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
LPCAT4Q643R3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.72■□□□□ 0.75
LPCAT4Q643R3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.72■□□□□ 0.75
LPCAT4Q643R3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LPCAT4Q643R3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LPCAT4Q643R3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
LPCAT4Q643R3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LPCAT4Q643R3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.71■□□□□ 0.75
LPCAT4Q643R3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
LPCAT4Q643R3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LPCAT4Q643R3 AC099778.1-201ENST00000568593 1911 ntBASIC19.71■□□□□ 0.75
LPCAT4Q643R3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.71■□□□□ 0.75
LPCAT4Q643R3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.71■□□□□ 0.75
LPCAT4Q643R3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.71■□□□□ 0.75
LPCAT4Q643R3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LPCAT4Q643R3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LPCAT4Q643R3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.71■□□□□ 0.75
LPCAT4Q643R3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LPCAT4Q643R3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.71■□□□□ 0.75
LPCAT4Q643R3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.71■□□□□ 0.75
LPCAT4Q643R3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LPCAT4Q643R3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms