Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
ARFGEF3Q5TH69 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.84■□□□□ 0.45
ARFGEF3Q5TH69 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ARFGEF3Q5TH69 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ARFGEF3Q5TH69 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ARFGEF3Q5TH69 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
ARFGEF3Q5TH69 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.84■□□□□ 0.45
ARFGEF3Q5TH69 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
ARFGEF3Q5TH69 AC243732.1-201ENST00000612648 864 ntBASIC17.84■□□□□ 0.45
ARFGEF3Q5TH69 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ARFGEF3Q5TH69 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ARFGEF3Q5TH69 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
ARFGEF3Q5TH69 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
ARFGEF3Q5TH69 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
ARFGEF3Q5TH69 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ARFGEF3Q5TH69 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ARFGEF3Q5TH69 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
ARFGEF3Q5TH69 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
ARFGEF3Q5TH69 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
ARFGEF3Q5TH69 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.83■□□□□ 0.45
ARFGEF3Q5TH69 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.83■□□□□ 0.45
ARFGEF3Q5TH69 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
ARFGEF3Q5TH69 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ARFGEF3Q5TH69 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ARFGEF3Q5TH69 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ARFGEF3Q5TH69 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ARFGEF3Q5TH69 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ARFGEF3Q5TH69 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.83■□□□□ 0.44
ARFGEF3Q5TH69 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ARFGEF3Q5TH69 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.83■□□□□ 0.44
ARFGEF3Q5TH69 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.83■□□□□ 0.44
ARFGEF3Q5TH69 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.83■□□□□ 0.44
ARFGEF3Q5TH69 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.83■□□□□ 0.44
ARFGEF3Q5TH69 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ARFGEF3Q5TH69 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ARFGEF3Q5TH69 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.83■□□□□ 0.44
ARFGEF3Q5TH69 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.83■□□□□ 0.44
ARFGEF3Q5TH69 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.82■□□□□ 0.44
ARFGEF3Q5TH69 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ARFGEF3Q5TH69 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ARFGEF3Q5TH69 AL512625.2-201ENST00000417533 625 ntBASIC17.82■□□□□ 0.44
ARFGEF3Q5TH69 KRT18P6-201ENST00000555540 1265 ntBASIC17.82■□□□□ 0.44
ARFGEF3Q5TH69 MIR4651-201ENST00000582622 73 ntBASIC17.82■□□□□ 0.44
ARFGEF3Q5TH69 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ARFGEF3Q5TH69 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.82■□□□□ 0.44
ARFGEF3Q5TH69 AC242852.2-201ENST00000615738 1807 ntBASIC17.82■□□□□ 0.44
ARFGEF3Q5TH69 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ARFGEF3Q5TH69 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
ARFGEF3Q5TH69 EP400NL-214ENST00000641289 2402 ntBASIC17.82■□□□□ 0.44
ARFGEF3Q5TH69 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
ARFGEF3Q5TH69 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.82■□□□□ 0.44
ARFGEF3Q5TH69 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
ARFGEF3Q5TH69 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ARFGEF3Q5TH69 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARFGEF3Q5TH69 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ARFGEF3Q5TH69 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.81■□□□□ 0.44
ARFGEF3Q5TH69 AC083880.1-201ENST00000608266 535 ntBASIC17.81■□□□□ 0.44
ARFGEF3Q5TH69 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.81■□□□□ 0.44
ARFGEF3Q5TH69 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ARFGEF3Q5TH69 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARFGEF3Q5TH69 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.81■□□□□ 0.44
ARFGEF3Q5TH69 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARFGEF3Q5TH69 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARFGEF3Q5TH69 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARFGEF3Q5TH69 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.81■□□□□ 0.44
ARFGEF3Q5TH69 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.81■□□□□ 0.44
ARFGEF3Q5TH69 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.81■□□□□ 0.44
ARFGEF3Q5TH69 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ARFGEF3Q5TH69 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARFGEF3Q5TH69 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.81■□□□□ 0.44
ARFGEF3Q5TH69 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.81■□□□□ 0.44
ARFGEF3Q5TH69 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARFGEF3Q5TH69 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARFGEF3Q5TH69 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ARFGEF3Q5TH69 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARFGEF3Q5TH69 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ARFGEF3Q5TH69 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.8■□□□□ 0.44
ARFGEF3Q5TH69 OR10C1-204ENST00000622521 1039 ntBASIC17.8■□□□□ 0.44
ARFGEF3Q5TH69 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ARFGEF3Q5TH69 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.8■□□□□ 0.44
ARFGEF3Q5TH69 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.8■□□□□ 0.44
ARFGEF3Q5TH69 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.8■□□□□ 0.44
ARFGEF3Q5TH69 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ARFGEF3Q5TH69 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.8■□□□□ 0.44
ARFGEF3Q5TH69 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.8■□□□□ 0.44
ARFGEF3Q5TH69 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.8■□□□□ 0.44
ARFGEF3Q5TH69 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.8■□□□□ 0.44
ARFGEF3Q5TH69 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.8■□□□□ 0.44
ARFGEF3Q5TH69 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARFGEF3Q5TH69 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARFGEF3Q5TH69 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARFGEF3Q5TH69 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARFGEF3Q5TH69 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ARFGEF3Q5TH69 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ARFGEF3Q5TH69 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARFGEF3Q5TH69 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ARFGEF3Q5TH69 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARFGEF3Q5TH69 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.79■□□□□ 0.44
ARFGEF3Q5TH69 GUSBP5-202ENST00000510805 1989 ntBASIC17.79■□□□□ 0.44
ARFGEF3Q5TH69 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms