Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 AC104187.1-201ENST00000607510 612 ntBASIC22.69■■□□□ 1.22
CBWD3Q5JTY5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
CBWD3Q5JTY5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.69■■□□□ 1.22
CBWD3Q5JTY5 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CBWD3Q5JTY5 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CBWD3Q5JTY5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CBWD3Q5JTY5 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CBWD3Q5JTY5 AP004607.4-201ENST00000530158 1459 ntBASIC22.68■■□□□ 1.22
CBWD3Q5JTY5 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CBWD3Q5JTY5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.68■■□□□ 1.22
CBWD3Q5JTY5 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.68■■□□□ 1.22
CBWD3Q5JTY5 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.68■■□□□ 1.22
CBWD3Q5JTY5 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.68■■□□□ 1.22
CBWD3Q5JTY5 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CBWD3Q5JTY5 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CBWD3Q5JTY5 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CBWD3Q5JTY5 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
CBWD3Q5JTY5 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CBWD3Q5JTY5 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CBWD3Q5JTY5 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
CBWD3Q5JTY5 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.68■■□□□ 1.22
CBWD3Q5JTY5 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CBWD3Q5JTY5 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CBWD3Q5JTY5 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CBWD3Q5JTY5 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CBWD3Q5JTY5 AC097381.1-201ENST00000429019 1296 ntBASIC22.67■■□□□ 1.22
CBWD3Q5JTY5 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CBWD3Q5JTY5 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.67■■□□□ 1.22
CBWD3Q5JTY5 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.67■■□□□ 1.22
CBWD3Q5JTY5 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.67■■□□□ 1.22
CBWD3Q5JTY5 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CBWD3Q5JTY5 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CBWD3Q5JTY5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
CBWD3Q5JTY5 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CBWD3Q5JTY5 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
CBWD3Q5JTY5 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CBWD3Q5JTY5 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CBWD3Q5JTY5 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CBWD3Q5JTY5 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC22.66■■□□□ 1.22
CBWD3Q5JTY5 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CBWD3Q5JTY5 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.66■■□□□ 1.22
CBWD3Q5JTY5 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CBWD3Q5JTY5 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.66■■□□□ 1.22
CBWD3Q5JTY5 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.66■■□□□ 1.22
CBWD3Q5JTY5 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CBWD3Q5JTY5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CBWD3Q5JTY5 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CBWD3Q5JTY5 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CBWD3Q5JTY5 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC22.66■■□□□ 1.22
CBWD3Q5JTY5 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.66■■□□□ 1.22
CBWD3Q5JTY5 AC019069.1-201ENST00000610008 1333 ntBASIC22.65■■□□□ 1.22
CBWD3Q5JTY5 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CBWD3Q5JTY5 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CBWD3Q5JTY5 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CBWD3Q5JTY5 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.65■■□□□ 1.22
CBWD3Q5JTY5 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.65■■□□□ 1.22
CBWD3Q5JTY5 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.65■■□□□ 1.22
CBWD3Q5JTY5 AC010141.2-201ENST00000452426 721 ntBASIC22.65■■□□□ 1.22
CBWD3Q5JTY5 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.65■■□□□ 1.22
CBWD3Q5JTY5 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CBWD3Q5JTY5 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.65■■□□□ 1.22
CBWD3Q5JTY5 AC087623.3-201ENST00000607047 1098 ntBASIC22.65■■□□□ 1.22
CBWD3Q5JTY5 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CBWD3Q5JTY5 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.65■■□□□ 1.22
CBWD3Q5JTY5 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.64■■□□□ 1.22
CBWD3Q5JTY5 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CBWD3Q5JTY5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CBWD3Q5JTY5 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22.64■■□□□ 1.22
CBWD3Q5JTY5 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CBWD3Q5JTY5 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CBWD3Q5JTY5 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.64■■□□□ 1.21
CBWD3Q5JTY5 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.64■■□□□ 1.21
CBWD3Q5JTY5 MIR6821-201ENST00000617625 74 ntBASIC22.64■■□□□ 1.21
CBWD3Q5JTY5 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
CBWD3Q5JTY5 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
CBWD3Q5JTY5 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CBWD3Q5JTY5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CBWD3Q5JTY5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.63■■□□□ 1.21
CBWD3Q5JTY5 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CBWD3Q5JTY5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.63■■□□□ 1.21
CBWD3Q5JTY5 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.63■■□□□ 1.21
CBWD3Q5JTY5 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CBWD3Q5JTY5 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CBWD3Q5JTY5 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.63■■□□□ 1.21
CBWD3Q5JTY5 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.63■■□□□ 1.21
CBWD3Q5JTY5 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.63■■□□□ 1.21
CBWD3Q5JTY5 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CBWD3Q5JTY5 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CBWD3Q5JTY5 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CBWD3Q5JTY5 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.62■■□□□ 1.21
CBWD3Q5JTY5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
CBWD3Q5JTY5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CBWD3Q5JTY5 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.62■■□□□ 1.21
CBWD3Q5JTY5 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.62■■□□□ 1.21
CBWD3Q5JTY5 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.62■■□□□ 1.21
CBWD3Q5JTY5 AP001160.3-201ENST00000601484 763 ntBASIC22.62■■□□□ 1.21
CBWD3Q5JTY5 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CBWD3Q5JTY5 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.62■■□□□ 1.21
CBWD3Q5JTY5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.62■■□□□ 1.21
CBWD3Q5JTY5 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms