Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.79■□□□□ 0.76
RUNDC3AQ59EK9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
RUNDC3AQ59EK9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.79■□□□□ 0.76
RUNDC3AQ59EK9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RUNDC3AQ59EK9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RUNDC3AQ59EK9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RUNDC3AQ59EK9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RUNDC3AQ59EK9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RUNDC3AQ59EK9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RUNDC3AQ59EK9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RUNDC3AQ59EK9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RUNDC3AQ59EK9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RUNDC3AQ59EK9 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RUNDC3AQ59EK9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RUNDC3AQ59EK9 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.78■□□□□ 0.76
RUNDC3AQ59EK9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RUNDC3AQ59EK9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RUNDC3AQ59EK9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RUNDC3AQ59EK9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.78■□□□□ 0.76
RUNDC3AQ59EK9 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RUNDC3AQ59EK9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RUNDC3AQ59EK9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
RUNDC3AQ59EK9 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.78■□□□□ 0.76
RUNDC3AQ59EK9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
RUNDC3AQ59EK9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RUNDC3AQ59EK9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RUNDC3AQ59EK9 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RUNDC3AQ59EK9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RUNDC3AQ59EK9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RUNDC3AQ59EK9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RUNDC3AQ59EK9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RUNDC3AQ59EK9 AC121338.2-201ENST00000622535 1744 ntBASIC19.77■□□□□ 0.76
RUNDC3AQ59EK9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RUNDC3AQ59EK9 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RUNDC3AQ59EK9 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RUNDC3AQ59EK9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.77■□□□□ 0.76
RUNDC3AQ59EK9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.77■□□□□ 0.76
RUNDC3AQ59EK9 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RUNDC3AQ59EK9 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.75
RUNDC3AQ59EK9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RUNDC3AQ59EK9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
RUNDC3AQ59EK9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
RUNDC3AQ59EK9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RUNDC3AQ59EK9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RUNDC3AQ59EK9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RUNDC3AQ59EK9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.76■□□□□ 0.75
RUNDC3AQ59EK9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RUNDC3AQ59EK9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RUNDC3AQ59EK9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.76■□□□□ 0.75
RUNDC3AQ59EK9 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.76■□□□□ 0.75
RUNDC3AQ59EK9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RUNDC3AQ59EK9 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RUNDC3AQ59EK9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RUNDC3AQ59EK9 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RUNDC3AQ59EK9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RUNDC3AQ59EK9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RUNDC3AQ59EK9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RUNDC3AQ59EK9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RUNDC3AQ59EK9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RUNDC3AQ59EK9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RUNDC3AQ59EK9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.75■□□□□ 0.75
RUNDC3AQ59EK9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RUNDC3AQ59EK9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
RUNDC3AQ59EK9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RUNDC3AQ59EK9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RUNDC3AQ59EK9 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RUNDC3AQ59EK9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.75■□□□□ 0.75
RUNDC3AQ59EK9 BX842568.3-201ENST00000418104 571 ntBASIC19.75■□□□□ 0.75
RUNDC3AQ59EK9 AC131281.2-201ENST00000520478 145 ntBASIC19.75■□□□□ 0.75
RUNDC3AQ59EK9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.75■□□□□ 0.75
RUNDC3AQ59EK9 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.75■□□□□ 0.75
RUNDC3AQ59EK9 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RUNDC3AQ59EK9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RUNDC3AQ59EK9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RUNDC3AQ59EK9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RUNDC3AQ59EK9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.74■□□□□ 0.75
RUNDC3AQ59EK9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RUNDC3AQ59EK9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RUNDC3AQ59EK9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RUNDC3AQ59EK9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RUNDC3AQ59EK9 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RUNDC3AQ59EK9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RUNDC3AQ59EK9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.74■□□□□ 0.75
RUNDC3AQ59EK9 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.74■□□□□ 0.75
RUNDC3AQ59EK9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RUNDC3AQ59EK9 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RUNDC3AQ59EK9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RUNDC3AQ59EK9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.74■□□□□ 0.75
RUNDC3AQ59EK9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.74■□□□□ 0.75
RUNDC3AQ59EK9 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RUNDC3AQ59EK9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
RUNDC3AQ59EK9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.74■□□□□ 0.75
RUNDC3AQ59EK9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.73■□□□□ 0.75
RUNDC3AQ59EK9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RUNDC3AQ59EK9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RUNDC3AQ59EK9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RUNDC3AQ59EK9 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RUNDC3AQ59EK9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.73■□□□□ 0.75
RUNDC3AQ59EK9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RUNDC3AQ59EK9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms