Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.57■□□□□ 0.88
CACNA1EQ15878 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CACNA1EQ15878 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
CACNA1EQ15878 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.57■□□□□ 0.88
CACNA1EQ15878 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CACNA1EQ15878 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CACNA1EQ15878 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.56■□□□□ 0.88
CACNA1EQ15878 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.56■□□□□ 0.88
CACNA1EQ15878 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.56■□□□□ 0.88
CACNA1EQ15878 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CACNA1EQ15878 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CACNA1EQ15878 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CACNA1EQ15878 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.56■□□□□ 0.88
CACNA1EQ15878 AC069544.1-201ENST00000609399 999 ntBASIC20.56■□□□□ 0.88
CACNA1EQ15878 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.56■□□□□ 0.88
CACNA1EQ15878 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.56■□□□□ 0.88
CACNA1EQ15878 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CACNA1EQ15878 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.56■□□□□ 0.88
CACNA1EQ15878 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
CACNA1EQ15878 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CACNA1EQ15878 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CACNA1EQ15878 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.55■□□□□ 0.88
CACNA1EQ15878 MIR4497-201ENST00000583208 89 ntBASIC20.55■□□□□ 0.88
CACNA1EQ15878 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CACNA1EQ15878 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CACNA1EQ15878 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.55■□□□□ 0.88
CACNA1EQ15878 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CACNA1EQ15878 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CACNA1EQ15878 LSM12P1-201ENST00000411836 588 ntBASIC20.55■□□□□ 0.88
CACNA1EQ15878 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.55■□□□□ 0.88
CACNA1EQ15878 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.55■□□□□ 0.88
CACNA1EQ15878 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CACNA1EQ15878 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CACNA1EQ15878 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CACNA1EQ15878 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CACNA1EQ15878 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CACNA1EQ15878 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.54■□□□□ 0.88
CACNA1EQ15878 AC091799.1-201ENST00000422823 811 ntBASIC20.54■□□□□ 0.88
CACNA1EQ15878 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CACNA1EQ15878 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CACNA1EQ15878 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CACNA1EQ15878 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.54■□□□□ 0.88
CACNA1EQ15878 AL359736.2-201ENST00000621992 437 ntBASIC20.54■□□□□ 0.88
CACNA1EQ15878 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CACNA1EQ15878 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CACNA1EQ15878 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CACNA1EQ15878 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CACNA1EQ15878 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CACNA1EQ15878 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.53■□□□□ 0.88
CACNA1EQ15878 MIR718-201ENST00000390190 70 ntBASIC20.53■□□□□ 0.88
CACNA1EQ15878 FAM210CP-201ENST00000445714 574 ntBASIC20.53■□□□□ 0.88
CACNA1EQ15878 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CACNA1EQ15878 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CACNA1EQ15878 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.53■□□□□ 0.88
CACNA1EQ15878 AC245052.3-201ENST00000450182 901 ntBASIC20.53■□□□□ 0.88
CACNA1EQ15878 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CACNA1EQ15878 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CACNA1EQ15878 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
CACNA1EQ15878 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CACNA1EQ15878 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CACNA1EQ15878 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CACNA1EQ15878 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CACNA1EQ15878 MCRIP2P1-201ENST00000394346 511 ntBASIC20.52■□□□□ 0.88
CACNA1EQ15878 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.52■□□□□ 0.88
CACNA1EQ15878 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CACNA1EQ15878 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.52■□□□□ 0.88
CACNA1EQ15878 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.52■□□□□ 0.87
CACNA1EQ15878 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.52■□□□□ 0.87
CACNA1EQ15878 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.52■□□□□ 0.87
CACNA1EQ15878 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.52■□□□□ 0.87
CACNA1EQ15878 FAM21FP-204ENST00000608637 956 ntBASIC20.52■□□□□ 0.87
CACNA1EQ15878 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CACNA1EQ15878 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.51■□□□□ 0.87
CACNA1EQ15878 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.51■□□□□ 0.87
CACNA1EQ15878 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CACNA1EQ15878 C11orf96-202ENST00000528572 1834 ntBASIC20.51■□□□□ 0.87
CACNA1EQ15878 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CACNA1EQ15878 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CACNA1EQ15878 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CACNA1EQ15878 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CACNA1EQ15878 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CACNA1EQ15878 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CACNA1EQ15878 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.51■□□□□ 0.87
CACNA1EQ15878 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CACNA1EQ15878 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.51■□□□□ 0.87
CACNA1EQ15878 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CACNA1EQ15878 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.5■□□□□ 0.87
CACNA1EQ15878 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.5■□□□□ 0.87
CACNA1EQ15878 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CACNA1EQ15878 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CACNA1EQ15878 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CACNA1EQ15878 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CACNA1EQ15878 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CACNA1EQ15878 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.5■□□□□ 0.87
CACNA1EQ15878 AC007322.3-201ENST00000426526 701 ntBASIC20.5■□□□□ 0.87
CACNA1EQ15878 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.5■□□□□ 0.87
CACNA1EQ15878 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.5■□□□□ 0.87
CACNA1EQ15878 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.5■□□□□ 0.87
CACNA1EQ15878 AL589743.5-201ENST00000616611 1050 ntBASIC20.5■□□□□ 0.87
CACNA1EQ15878 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms