Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 MCD1YDL003W 1701 nt2.02□□□□□ -2.09
HRD1Q08109 AFI1YOR129C 2682 nt2.02□□□□□ -2.09
HRD1Q08109 PDR3YBL005W 2931 nt2.01□□□□□ -2.09
HRD1Q08109 PHO91YNR013C 2685 nt2.01□□□□□ -2.09
HRD1Q08109 YCR064CYCR064C 411 nt2.01□□□□□ -2.09
HRD1Q08109 RRP42YDL111C 798 nt2.01□□□□□ -2.09
HRD1Q08109 TAN1YGL232W 870 nt2.01□□□□□ -2.09
HRD1Q08109 YHR097CYHR097C 1101 nt2.01□□□□□ -2.09
HRD1Q08109 AIM32YML050W 936 nt2.01□□□□□ -2.09
HRD1Q08109 PRE8YML092C 753 nt2.01□□□□□ -2.09
HRD1Q08109 YSF3YNL138W-A 258 nt2.01□□□□□ -2.09
HRD1Q08109 YBL094CYBL094C 333 nt2.01□□□□□ -2.09
HRD1Q08109 HMT1YBR034C 1047 nt2.01□□□□□ -2.09
HRD1Q08109 MBA1YBR185C 837 nt2.01□□□□□ -2.09
HRD1Q08109 SSD1YDR293C 3753 nt2.01□□□□□ -2.09
HRD1Q08109 HSC82YMR186W 2118 nt2□□□□□ -2.09
HRD1Q08109 KSP1YHR082C 3090 nt2□□□□□ -2.09
HRD1Q08109 YGR168CYGR168C 1131 nt2□□□□□ -2.09
HRD1Q08109 MCR1YKL150W 909 nt2□□□□□ -2.09
HRD1Q08109 NNT1YLR285W 786 nt2□□□□□ -2.09
HRD1Q08109 YNL046WYNL046W 519 nt2□□□□□ -2.09
HRD1Q08109 ALG14YBR070C 714 nt2□□□□□ -2.09
HRD1Q08109 ANR2YKL047W 1551 nt2□□□□□ -2.09
HRD1Q08109 STE11YLR362W 2154 nt2□□□□□ -2.09
HRD1Q08109 TOR2YKL203C 7425 nt2□□□□□ -2.09
HRD1Q08109 USO1YDL058W 5373 nt1.99□□□□□ -2.09
HRD1Q08109 SCY1YGL083W 2415 nt1.99□□□□□ -2.09
HRD1Q08109 SCL1YGL011C 759 nt1.99□□□□□ -2.09
HRD1Q08109 ERV1YGR029W 570 nt1.99□□□□□ -2.09
HRD1Q08109 MRPL6YHR147C 645 nt1.99□□□□□ -2.09
HRD1Q08109 YIL089WYIL089W 618 nt1.99□□□□□ -2.09
HRD1Q08109 CSM2YIL132C 642 nt1.99□□□□□ -2.09
HRD1Q08109 YIL156W-BYIL156W-B 222 nt1.99□□□□□ -2.09
HRD1Q08109 EMC6YLL014W 327 nt1.99□□□□□ -2.09
HRD1Q08109 RDN58-1RDN58-1 158 nt1.99□□□□□ -2.09
HRD1Q08109 RDN58-2RDN58-2 158 nt1.99□□□□□ -2.09
HRD1Q08109 ARF3YOR094W 552 nt1.99□□□□□ -2.09
HRD1Q08109 POL30YBR088C 777 nt1.99□□□□□ -2.09
HRD1Q08109 SMC6YLR383W 3345 nt1.99□□□□□ -2.09
HRD1Q08109 SKP2YNL311C 2292 nt1.98□□□□□ -2.09
HRD1Q08109 PLM2YDR501W 1566 nt1.98□□□□□ -2.09
HRD1Q08109 NOP14YDL148C 2433 nt1.98□□□□□ -2.09
HRD1Q08109 tC(GCA)BtC(GCA)B 72 nt1.98□□□□□ -2.09
HRD1Q08109 tC(GCA)GtC(GCA)G 72 nt1.98□□□□□ -2.09
HRD1Q08109 tC(GCA)P1tC(GCA)P1 72 nt1.98□□□□□ -2.09
HRD1Q08109 tC(GCA)P2tC(GCA)P2 72 nt1.98□□□□□ -2.09
HRD1Q08109 IZH1YDR492W 951 nt1.98□□□□□ -2.09
HRD1Q08109 ERG25YGR060W 930 nt1.98□□□□□ -2.09
HRD1Q08109 EBP2YKL172W 1284 nt1.98□□□□□ -2.09
HRD1Q08109 NUP170YBL079W 4509 nt1.98□□□□□ -2.09
HRD1Q08109 JIP5YPR169W 1479 nt1.97□□□□□ -2.09
HRD1Q08109 DSS1YMR287C 2910 nt1.97□□□□□ -2.09
HRD1Q08109 YNL018CYNL018C 1839 nt1.97□□□□□ -2.09
HRD1Q08109 RPL27BYDR471W 411 nt1.97□□□□□ -2.09
HRD1Q08109 TFA2YKR062W 987 nt1.97□□□□□ -2.09
HRD1Q08109 SDO1YLR022C 753 nt1.97□□□□□ -2.09
HRD1Q08109 SUB1YMR039C 879 nt1.97□□□□□ -2.09
HRD1Q08109 HAT1YPL001W 1125 nt1.97□□□□□ -2.09
HRD1Q08109 RFC5YBR087W 1065 nt1.97□□□□□ -2.09
HRD1Q08109 RPN4YDL020C 1596 nt1.97□□□□□ -2.09
HRD1Q08109 YHR214C-BYHR214C-B 5382 nt1.97□□□□□ -2.09
HRD1Q08109 MSB1YOR188W 3414 nt1.97□□□□□ -2.09
HRD1Q08109 RRP1YDR087C 837 nt1.96□□□□□ -2.1
HRD1Q08109 PTI1YGR156W 1278 nt1.96□□□□□ -2.1
HRD1Q08109 SPO16YHR153C 597 nt1.96□□□□□ -2.1
HRD1Q08109 RPS10AYOR293W 318 nt1.96□□□□□ -2.1
HRD1Q08109 ARO7YPR060C 771 nt1.96□□□□□ -2.1
HRD1Q08109 VPS9YML097C 1356 nt1.96□□□□□ -2.1
HRD1Q08109 ROY1YMR258C 1662 nt1.96□□□□□ -2.1
HRD1Q08109 TMN3YER113C 2121 nt1.96□□□□□ -2.1
HRD1Q08109 snR70snR70 164 nt1.95□□□□□ -2.1
HRD1Q08109 PCL2YDL127W 927 nt1.95□□□□□ -2.1
HRD1Q08109 RRF1YHR038W 693 nt1.95□□□□□ -2.1
HRD1Q08109 YAL069WYAL069W 315 nt1.95□□□□□ -2.1
HRD1Q08109 YET2YMR040W 483 nt1.95□□□□□ -2.1
HRD1Q08109 YBL096CYBL096C 309 nt1.95□□□□□ -2.1
HRD1Q08109 YOL019W-AYOL019W-A 153 nt1.95□□□□□ -2.1
HRD1Q08109 YDR179W-AYDR179W-A 1392 nt1.95□□□□□ -2.1
HRD1Q08109 AGE1YDR524C 1449 nt1.94□□□□□ -2.1
HRD1Q08109 SEN54YPL083C 1404 nt1.94□□□□□ -2.1
HRD1Q08109 YDR222WYDR222W 1248 nt1.94□□□□□ -2.1
HRD1Q08109 RNH202YDR279W 1053 nt1.94□□□□□ -2.1
HRD1Q08109 TIM11YDR322C-A 291 nt1.94□□□□□ -2.1
HRD1Q08109 YGR050CYGR050C 357 nt1.94□□□□□ -2.1
HRD1Q08109 YGR190CYGR190C 366 nt1.94□□□□□ -2.1
HRD1Q08109 YIL068W-AYIL068W-A 384 nt1.94□□□□□ -2.1
HRD1Q08109 YLR290CYLR290C 834 nt1.94□□□□□ -2.1
HRD1Q08109 RAD10YML095C 633 nt1.94□□□□□ -2.1
HRD1Q08109 ISU1YPL135W 498 nt1.94□□□□□ -2.1
HRD1Q08109 SLN1YIL147C 3663 nt1.94□□□□□ -2.1
HRD1Q08109 TAE2YPL009C 3117 nt1.94□□□□□ -2.1
HRD1Q08109 STN1YDR082W 1485 nt1.94□□□□□ -2.1
HRD1Q08109 YBR259WYBR259W 2067 nt1.94□□□□□ -2.1
HRD1Q08109 YPR097WYPR097W 3222 nt1.93□□□□□ -2.1
HRD1Q08109 BRR6YGL247W 594 nt1.93□□□□□ -2.1
HRD1Q08109 CIR1YGR207C 786 nt1.93□□□□□ -2.1
HRD1Q08109 YLR400WYLR400W 474 nt1.93□□□□□ -2.1
HRD1Q08109 OSW7YFR039C 1533 nt1.92□□□□□ -2.1
HRD1Q08109 RTN1YDR233C 888 nt1.92□□□□□ -2.1
HRD1Q08109 GET1YGL020C 708 nt1.92□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 18.4 ms