Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST1H3AP68431 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.31■□□□□ 0.52
HIST1H3AP68431 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST1H3AP68431 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H3AP68431 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H3AP68431 AC061975.6-201ENST00000579045 1553 ntBASIC18.3■□□□□ 0.52
HIST1H3AP68431 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H3AP68431 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H3AP68431 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H3AP68431 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H3AP68431 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H3AP68431 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HIST1H3AP68431 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H3AP68431 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HIST1H3AP68431 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.3■□□□□ 0.52
HIST1H3AP68431 AC138907.5-202ENST00000569484 235 ntBASIC18.3■□□□□ 0.52
HIST1H3AP68431 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.3■□□□□ 0.52
HIST1H3AP68431 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H3AP68431 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H3AP68431 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
HIST1H3AP68431 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.3■□□□□ 0.52
HIST1H3AP68431 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.3■□□□□ 0.52
HIST1H3AP68431 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HIST1H3AP68431 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H3AP68431 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H3AP68431 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H3AP68431 POU5F1P4-201ENST00000413175 1085 ntBASIC18.29■□□□□ 0.52
HIST1H3AP68431 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HIST1H3AP68431 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.29■□□□□ 0.52
HIST1H3AP68431 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.29■□□□□ 0.52
HIST1H3AP68431 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.29■□□□□ 0.52
HIST1H3AP68431 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
HIST1H3AP68431 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HIST1H3AP68431 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.29■□□□□ 0.52
HIST1H3AP68431 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H3AP68431 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.29■□□□□ 0.52
HIST1H3AP68431 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.29■□□□□ 0.52
HIST1H3AP68431 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H3AP68431 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H3AP68431 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H3AP68431 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H3AP68431 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H3AP68431 AP004607.4-201ENST00000530158 1459 ntBASIC18.28■□□□□ 0.52
HIST1H3AP68431 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H3AP68431 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.28■□□□□ 0.52
HIST1H3AP68431 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H3AP68431 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H3AP68431 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HIST1H3AP68431 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HIST1H3AP68431 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.28■□□□□ 0.52
HIST1H3AP68431 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HIST1H3AP68431 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.28■□□□□ 0.52
HIST1H3AP68431 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.28■□□□□ 0.52
HIST1H3AP68431 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.28■□□□□ 0.52
HIST1H3AP68431 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.28■□□□□ 0.52
HIST1H3AP68431 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H3AP68431 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H3AP68431 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H3AP68431 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H3AP68431 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H3AP68431 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
HIST1H3AP68431 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.28■□□□□ 0.52
HIST1H3AP68431 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST1H3AP68431 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.27■□□□□ 0.52
HIST1H3AP68431 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
HIST1H3AP68431 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST1H3AP68431 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST1H3AP68431 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST1H3AP68431 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.27■□□□□ 0.52
HIST1H3AP68431 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HIST1H3AP68431 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.27■□□□□ 0.52
HIST1H3AP68431 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.27■□□□□ 0.52
HIST1H3AP68431 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.27■□□□□ 0.52
HIST1H3AP68431 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.27■□□□□ 0.52
HIST1H3AP68431 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST1H3AP68431 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.27■□□□□ 0.52
HIST1H3AP68431 CCDC92B-201ENST00000575506 885 ntBASIC18.27■□□□□ 0.52
HIST1H3AP68431 AC008175.2-201ENST00000612840 297 ntBASIC18.27■□□□□ 0.52
HIST1H3AP68431 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.27■□□□□ 0.52
HIST1H3AP68431 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HIST1H3AP68431 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.27■□□□□ 0.51
HIST1H3AP68431 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HIST1H3AP68431 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST1H3AP68431 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST1H3AP68431 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST1H3AP68431 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HIST1H3AP68431 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.26■□□□□ 0.51
HIST1H3AP68431 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.26■□□□□ 0.51
HIST1H3AP68431 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HIST1H3AP68431 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
HIST1H3AP68431 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.26■□□□□ 0.51
HIST1H3AP68431 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.26■□□□□ 0.51
HIST1H3AP68431 AC010141.2-201ENST00000452426 721 ntBASIC18.26■□□□□ 0.51
HIST1H3AP68431 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.26■□□□□ 0.51
HIST1H3AP68431 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.26■□□□□ 0.51
HIST1H3AP68431 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.26■□□□□ 0.51
HIST1H3AP68431 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.26■□□□□ 0.51
HIST1H3AP68431 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.26■□□□□ 0.51
HIST1H3AP68431 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST1H3AP68431 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms