Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACTA1P68133 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACTA1P68133 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.65■□□□□ 0.58
ACTA1P68133 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACTA1P68133 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ACTA1P68133 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACTA1P68133 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACTA1P68133 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.65■□□□□ 0.58
ACTA1P68133 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACTA1P68133 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ACTA1P68133 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ACTA1P68133 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ACTA1P68133 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.65■□□□□ 0.58
ACTA1P68133 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.65■□□□□ 0.58
ACTA1P68133 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
ACTA1P68133 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACTA1P68133 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACTA1P68133 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
ACTA1P68133 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
ACTA1P68133 SYT6-210ENST00000641643 1587 ntBASIC18.64■□□□□ 0.58
ACTA1P68133 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ACTA1P68133 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
ACTA1P68133 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ACTA1P68133 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ACTA1P68133 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
ACTA1P68133 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ACTA1P68133 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
ACTA1P68133 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ACTA1P68133 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.64■□□□□ 0.57
ACTA1P68133 AC011298.3-201ENST00000615796 283 ntBASIC18.64■□□□□ 0.57
ACTA1P68133 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
ACTA1P68133 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ACTA1P68133 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ACTA1P68133 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
ACTA1P68133 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ACTA1P68133 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.64■□□□□ 0.57
ACTA1P68133 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ACTA1P68133 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
ACTA1P68133 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACTA1P68133 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ACTA1P68133 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACTA1P68133 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.63■□□□□ 0.57
ACTA1P68133 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.63■□□□□ 0.57
ACTA1P68133 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.63■□□□□ 0.57
ACTA1P68133 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.63■□□□□ 0.57
ACTA1P68133 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.63■□□□□ 0.57
ACTA1P68133 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACTA1P68133 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
ACTA1P68133 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ACTA1P68133 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACTA1P68133 PLK5-205ENST00000642079 1969 ntBASIC18.62■□□□□ 0.57
ACTA1P68133 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ACTA1P68133 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ACTA1P68133 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
ACTA1P68133 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.62■□□□□ 0.57
ACTA1P68133 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
ACTA1P68133 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.62■□□□□ 0.57
ACTA1P68133 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ACTA1P68133 SERBP1P1-201ENST00000396021 1160 ntBASIC18.62■□□□□ 0.57
ACTA1P68133 SLC47A1P1-202ENST00000449666 945 ntBASIC18.62■□□□□ 0.57
ACTA1P68133 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.62■□□□□ 0.57
ACTA1P68133 AL512631.2-201ENST00000604634 923 ntBASIC18.62■□□□□ 0.57
ACTA1P68133 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.62■□□□□ 0.57
ACTA1P68133 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ACTA1P68133 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.62■□□□□ 0.57
ACTA1P68133 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ACTA1P68133 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.62■□□□□ 0.57
ACTA1P68133 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ACTA1P68133 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ACTA1P68133 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ACTA1P68133 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ACTA1P68133 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ACTA1P68133 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACTA1P68133 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACTA1P68133 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACTA1P68133 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ACTA1P68133 AC073314.1-201ENST00000568729 2216 ntBASIC18.61■□□□□ 0.57
ACTA1P68133 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.61■□□□□ 0.57
ACTA1P68133 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ACTA1P68133 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.61■□□□□ 0.57
ACTA1P68133 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACTA1P68133 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ACTA1P68133 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ACTA1P68133 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.61■□□□□ 0.57
ACTA1P68133 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ACTA1P68133 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.61■□□□□ 0.57
ACTA1P68133 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.61■□□□□ 0.57
ACTA1P68133 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ACTA1P68133 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACTA1P68133 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACTA1P68133 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ACTA1P68133 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.6■□□□□ 0.57
ACTA1P68133 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ACTA1P68133 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ACTA1P68133 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ACTA1P68133 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ACTA1P68133 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.6■□□□□ 0.57
ACTA1P68133 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ACTA1P68133 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.6■□□□□ 0.57
ACTA1P68133 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms