Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.4■□□□□ 0.54
LSM6P62312 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.4■□□□□ 0.54
LSM6P62312 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.4■□□□□ 0.54
LSM6P62312 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LSM6P62312 AC008175.2-201ENST00000612840 297 ntBASIC18.4■□□□□ 0.54
LSM6P62312 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSM6P62312 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
LSM6P62312 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSM6P62312 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.39■□□□□ 0.53
LSM6P62312 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.39■□□□□ 0.53
LSM6P62312 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSM6P62312 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSM6P62312 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSM6P62312 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LSM6P62312 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LSM6P62312 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.39■□□□□ 0.53
LSM6P62312 AL121603.2-201ENST00000557373 2117 ntBASIC18.39■□□□□ 0.53
LSM6P62312 AC138907.5-202ENST00000569484 235 ntBASIC18.39■□□□□ 0.53
LSM6P62312 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSM6P62312 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSM6P62312 AP004607.4-201ENST00000530158 1459 ntBASIC18.39■□□□□ 0.53
LSM6P62312 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSM6P62312 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LSM6P62312 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LSM6P62312 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LSM6P62312 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LSM6P62312 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.38■□□□□ 0.53
LSM6P62312 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.38■□□□□ 0.53
LSM6P62312 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
LSM6P62312 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.38■□□□□ 0.53
LSM6P62312 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSM6P62312 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LSM6P62312 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSM6P62312 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LSM6P62312 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM6P62312 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
LSM6P62312 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM6P62312 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.37■□□□□ 0.53
LSM6P62312 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.37■□□□□ 0.53
LSM6P62312 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.37■□□□□ 0.53
LSM6P62312 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM6P62312 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.37■□□□□ 0.53
LSM6P62312 TERF1P2-201ENST00000583350 1212 ntBASIC18.37■□□□□ 0.53
LSM6P62312 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.37■□□□□ 0.53
LSM6P62312 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSM6P62312 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSM6P62312 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LSM6P62312 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM6P62312 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.37■□□□□ 0.53
LSM6P62312 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSM6P62312 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM6P62312 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSM6P62312 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSM6P62312 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSM6P62312 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.36■□□□□ 0.53
LSM6P62312 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LSM6P62312 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LSM6P62312 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSM6P62312 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LSM6P62312 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LSM6P62312 ZNRF2P3-201ENST00000424200 374 ntBASIC18.36■□□□□ 0.53
LSM6P62312 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LSM6P62312 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
LSM6P62312 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.36■□□□□ 0.53
LSM6P62312 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.36■□□□□ 0.53
LSM6P62312 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.36■□□□□ 0.53
LSM6P62312 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LSM6P62312 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.35■□□□□ 0.53
LSM6P62312 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
LSM6P62312 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LSM6P62312 AC061975.6-201ENST00000579045 1553 ntBASIC18.35■□□□□ 0.53
LSM6P62312 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
LSM6P62312 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LSM6P62312 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.35■□□□□ 0.53
LSM6P62312 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.35■□□□□ 0.53
LSM6P62312 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.35■□□□□ 0.53
LSM6P62312 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.35■□□□□ 0.53
LSM6P62312 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.35■□□□□ 0.53
LSM6P62312 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LSM6P62312 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LSM6P62312 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.35■□□□□ 0.53
LSM6P62312 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
LSM6P62312 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.34■□□□□ 0.53
LSM6P62312 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSM6P62312 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSM6P62312 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSM6P62312 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LSM6P62312 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.34■□□□□ 0.53
LSM6P62312 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.34■□□□□ 0.53
LSM6P62312 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSM6P62312 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSM6P62312 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.34■□□□□ 0.53
LSM6P62312 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSM6P62312 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LSM6P62312 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.34■□□□□ 0.53
LSM6P62312 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LSM6P62312 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.34■□□□□ 0.53
LSM6P62312 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LSM6P62312 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LSM6P62312 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms