Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE2NP61088 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE2NP61088 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.41■□□□□ 0.54
UBE2NP61088 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBE2NP61088 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.41■□□□□ 0.54
UBE2NP61088 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBE2NP61088 AC004911.1-201ENST00000416316 871 ntBASIC18.41■□□□□ 0.54
UBE2NP61088 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.41■□□□□ 0.54
UBE2NP61088 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.41■□□□□ 0.54
UBE2NP61088 UBE2DNL-204ENST00000602536 740 ntBASIC18.41■□□□□ 0.54
UBE2NP61088 BID-214ENST00000617586 542 ntTSL 5 BASIC18.41■□□□□ 0.54
UBE2NP61088 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.41■□□□□ 0.54
UBE2NP61088 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.41■□□□□ 0.54
UBE2NP61088 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBE2NP61088 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE2NP61088 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.41■□□□□ 0.54
UBE2NP61088 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.41■□□□□ 0.54
UBE2NP61088 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE2NP61088 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBE2NP61088 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.4■□□□□ 0.54
UBE2NP61088 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
UBE2NP61088 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBE2NP61088 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
UBE2NP61088 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.4■□□□□ 0.54
UBE2NP61088 AC006015.1-201ENST00000429970 570 ntBASIC18.4■□□□□ 0.54
UBE2NP61088 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.4■□□□□ 0.54
UBE2NP61088 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBE2NP61088 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.4■□□□□ 0.54
UBE2NP61088 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.4■□□□□ 0.54
UBE2NP61088 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBE2NP61088 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.4■□□□□ 0.54
UBE2NP61088 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.4■□□□□ 0.54
UBE2NP61088 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBE2NP61088 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBE2NP61088 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBE2NP61088 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBE2NP61088 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
UBE2NP61088 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2NP61088 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2NP61088 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2NP61088 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2NP61088 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.39■□□□□ 0.53
UBE2NP61088 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.39■□□□□ 0.53
UBE2NP61088 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.39■□□□□ 0.53
UBE2NP61088 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
UBE2NP61088 MYCNOS-205ENST00000641950 531 ntBASIC18.39■□□□□ 0.53
UBE2NP61088 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2NP61088 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2NP61088 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2NP61088 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2NP61088 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2NP61088 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2NP61088 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2NP61088 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2NP61088 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
UBE2NP61088 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.38■□□□□ 0.53
UBE2NP61088 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2NP61088 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2NP61088 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.38■□□□□ 0.53
UBE2NP61088 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2NP61088 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.38■□□□□ 0.53
UBE2NP61088 AC092437.1-201ENST00000624794 1048 ntBASIC18.38■□□□□ 0.53
UBE2NP61088 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2NP61088 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2NP61088 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2NP61088 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
UBE2NP61088 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2NP61088 FBXW4P1-201ENST00000426721 2239 ntBASIC18.38■□□□□ 0.53
UBE2NP61088 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2NP61088 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2NP61088 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.38■□□□□ 0.53
UBE2NP61088 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2NP61088 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
UBE2NP61088 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2NP61088 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2NP61088 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
UBE2NP61088 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.37■□□□□ 0.53
UBE2NP61088 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
UBE2NP61088 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
UBE2NP61088 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2NP61088 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.37■□□□□ 0.53
UBE2NP61088 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.37■□□□□ 0.53
UBE2NP61088 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2NP61088 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
UBE2NP61088 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2NP61088 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.37■□□□□ 0.53
UBE2NP61088 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.37■□□□□ 0.53
UBE2NP61088 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2NP61088 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2NP61088 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2NP61088 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2NP61088 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.37■□□□□ 0.53
UBE2NP61088 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.37■□□□□ 0.53
UBE2NP61088 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2NP61088 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
UBE2NP61088 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2NP61088 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
UBE2NP61088 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2NP61088 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2NP61088 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms