Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB38P57729 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB38P57729 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAB38P57729 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB38P57729 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAB38P57729 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.76■□□□□ 0.75
RAB38P57729 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.76■□□□□ 0.75
RAB38P57729 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RAB38P57729 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.76■□□□□ 0.75
RAB38P57729 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.76■□□□□ 0.75
RAB38P57729 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.76■□□□□ 0.75
RAB38P57729 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB38P57729 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB38P57729 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.75■□□□□ 0.75
RAB38P57729 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB38P57729 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAB38P57729 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RAB38P57729 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.75■□□□□ 0.75
RAB38P57729 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RAB38P57729 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RAB38P57729 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAB38P57729 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.75■□□□□ 0.75
RAB38P57729 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.75■□□□□ 0.75
RAB38P57729 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
RAB38P57729 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.75■□□□□ 0.75
RAB38P57729 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.75■□□□□ 0.75
RAB38P57729 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.75■□□□□ 0.75
RAB38P57729 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.75■□□□□ 0.75
RAB38P57729 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB38P57729 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB38P57729 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB38P57729 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.74■□□□□ 0.75
RAB38P57729 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB38P57729 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RAB38P57729 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB38P57729 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
RAB38P57729 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB38P57729 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB38P57729 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RAB38P57729 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAB38P57729 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.74■□□□□ 0.75
RAB38P57729 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAB38P57729 IKBKGP1-201ENST00000612193 1073 ntBASIC19.74■□□□□ 0.75
RAB38P57729 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RAB38P57729 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RAB38P57729 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB38P57729 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.74■□□□□ 0.75
RAB38P57729 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAB38P57729 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.74■□□□□ 0.75
RAB38P57729 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB38P57729 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB38P57729 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB38P57729 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.73■□□□□ 0.75
RAB38P57729 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RAB38P57729 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.73■□□□□ 0.75
RAB38P57729 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RAB38P57729 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.73■□□□□ 0.75
RAB38P57729 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.73■□□□□ 0.75
RAB38P57729 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RAB38P57729 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.73■□□□□ 0.75
RAB38P57729 AC092437.1-201ENST00000624794 1048 ntBASIC19.73■□□□□ 0.75
RAB38P57729 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB38P57729 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.73■□□□□ 0.75
RAB38P57729 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB38P57729 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RAB38P57729 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB38P57729 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB38P57729 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RAB38P57729 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB38P57729 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RAB38P57729 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB38P57729 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RAB38P57729 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.72■□□□□ 0.75
RAB38P57729 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.72■□□□□ 0.75
RAB38P57729 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB38P57729 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.72■□□□□ 0.75
RAB38P57729 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB38P57729 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.72■□□□□ 0.75
RAB38P57729 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB38P57729 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.72■□□□□ 0.75
RAB38P57729 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RAB38P57729 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.71■□□□□ 0.75
RAB38P57729 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB38P57729 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB38P57729 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB38P57729 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
RAB38P57729 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.71■□□□□ 0.75
RAB38P57729 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.71■□□□□ 0.75
RAB38P57729 AL137784.2-201ENST00000607332 1000 ntBASIC19.71■□□□□ 0.75
RAB38P57729 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.71■□□□□ 0.75
RAB38P57729 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.71■□□□□ 0.75
RAB38P57729 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAB38P57729 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.7■□□□□ 0.74
RAB38P57729 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.7■□□□□ 0.74
RAB38P57729 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAB38P57729 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.7■□□□□ 0.74
RAB38P57729 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB38P57729 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB38P57729 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RAB38P57729 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms