Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PEX3P56589 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
PEX3P56589 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PEX3P56589 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
PEX3P56589 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PEX3P56589 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PEX3P56589 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.16■■□□□ 1.3
PEX3P56589 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.16■■□□□ 1.3
PEX3P56589 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PEX3P56589 MFSD11-216ENST00000590393 1141 ntBASIC23.16■■□□□ 1.3
PEX3P56589 AC011767.1-201ENST00000617410 1153 ntBASIC23.16■■□□□ 1.3
PEX3P56589 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PEX3P56589 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PEX3P56589 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
PEX3P56589 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PEX3P56589 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.16■■□□□ 1.3
PEX3P56589 Z98882.1-201ENST00000622160 2253 ntBASIC23.16■■□□□ 1.3
PEX3P56589 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PEX3P56589 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PEX3P56589 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
PEX3P56589 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PEX3P56589 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.15■■□□□ 1.3
PEX3P56589 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PEX3P56589 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
PEX3P56589 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PEX3P56589 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PEX3P56589 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PEX3P56589 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PEX3P56589 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.15■■□□□ 1.3
PEX3P56589 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.15■■□□□ 1.3
PEX3P56589 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
PEX3P56589 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
PEX3P56589 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PEX3P56589 KRT16P2-201ENST00000414673 1423 ntBASIC23.15■■□□□ 1.3
PEX3P56589 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PEX3P56589 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.14■■□□□ 1.3
PEX3P56589 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
PEX3P56589 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.14■■□□□ 1.29
PEX3P56589 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.14■■□□□ 1.29
PEX3P56589 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PEX3P56589 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.14■■□□□ 1.29
PEX3P56589 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PEX3P56589 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.14■■□□□ 1.29
PEX3P56589 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.14■■□□□ 1.29
PEX3P56589 SLC7A5P1-201ENST00000568957 537 ntBASIC23.14■■□□□ 1.29
PEX3P56589 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PEX3P56589 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.14■■□□□ 1.29
PEX3P56589 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PEX3P56589 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PEX3P56589 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.13■■□□□ 1.29
PEX3P56589 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PEX3P56589 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PEX3P56589 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.13■■□□□ 1.29
PEX3P56589 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.13■■□□□ 1.29
PEX3P56589 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.13■■□□□ 1.29
PEX3P56589 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.13■■□□□ 1.29
PEX3P56589 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.13■■□□□ 1.29
PEX3P56589 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.13■■□□□ 1.29
PEX3P56589 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.13■■□□□ 1.29
PEX3P56589 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PEX3P56589 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.13■■□□□ 1.29
PEX3P56589 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.13■■□□□ 1.29
PEX3P56589 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.13■■□□□ 1.29
PEX3P56589 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PEX3P56589 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
PEX3P56589 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PEX3P56589 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC23.12■■□□□ 1.29
PEX3P56589 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.12■■□□□ 1.29
PEX3P56589 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PEX3P56589 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
PEX3P56589 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PEX3P56589 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
PEX3P56589 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.12■■□□□ 1.29
PEX3P56589 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PEX3P56589 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PEX3P56589 AC080038.1-201ENST00000611274 1154 ntBASIC23.12■■□□□ 1.29
PEX3P56589 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PEX3P56589 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PEX3P56589 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PEX3P56589 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PEX3P56589 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PEX3P56589 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.11■■□□□ 1.29
PEX3P56589 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.11■■□□□ 1.29
PEX3P56589 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.11■■□□□ 1.29
PEX3P56589 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PEX3P56589 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PEX3P56589 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.1■■□□□ 1.29
PEX3P56589 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
PEX3P56589 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PEX3P56589 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
PEX3P56589 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
PEX3P56589 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
PEX3P56589 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PEX3P56589 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PEX3P56589 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PEX3P56589 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PEX3P56589 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PEX3P56589 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.09■■□□□ 1.29
PEX3P56589 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PEX3P56589 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 527.9 ms