Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
GFRA1P56159 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.86■□□□□ 0.61
GFRA1P56159 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.86■□□□□ 0.61
GFRA1P56159 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GFRA1P56159 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.86■□□□□ 0.61
GFRA1P56159 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GFRA1P56159 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GFRA1P56159 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GFRA1P56159 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
GFRA1P56159 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.86■□□□□ 0.61
GFRA1P56159 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
GFRA1P56159 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GFRA1P56159 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GFRA1P56159 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GFRA1P56159 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.85■□□□□ 0.61
GFRA1P56159 AC068338.2-201ENST00000563278 1430 ntBASIC18.85■□□□□ 0.61
GFRA1P56159 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
GFRA1P56159 HLA-L-209ENST00000420110 1011 ntBASIC18.85■□□□□ 0.61
GFRA1P56159 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.85■□□□□ 0.61
GFRA1P56159 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.85■□□□□ 0.61
GFRA1P56159 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
GFRA1P56159 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GFRA1P56159 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
GFRA1P56159 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GFRA1P56159 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GFRA1P56159 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GFRA1P56159 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.84■□□□□ 0.61
GFRA1P56159 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.84■□□□□ 0.61
GFRA1P56159 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.84■□□□□ 0.61
GFRA1P56159 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GFRA1P56159 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GFRA1P56159 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GFRA1P56159 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GFRA1P56159 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GFRA1P56159 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GFRA1P56159 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.84■□□□□ 0.61
GFRA1P56159 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GFRA1P56159 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GFRA1P56159 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.83■□□□□ 0.61
GFRA1P56159 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.83■□□□□ 0.61
GFRA1P56159 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
GFRA1P56159 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
GFRA1P56159 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GFRA1P56159 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GFRA1P56159 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GFRA1P56159 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GFRA1P56159 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
GFRA1P56159 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GFRA1P56159 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GFRA1P56159 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GFRA1P56159 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
GFRA1P56159 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
GFRA1P56159 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GFRA1P56159 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GFRA1P56159 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.82■□□□□ 0.6
GFRA1P56159 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GFRA1P56159 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GFRA1P56159 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
GFRA1P56159 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.82■□□□□ 0.6
GFRA1P56159 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GFRA1P56159 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.82■□□□□ 0.6
GFRA1P56159 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.82■□□□□ 0.6
GFRA1P56159 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GFRA1P56159 AC133552.2-202ENST00000575694 574 ntBASIC18.82■□□□□ 0.6
GFRA1P56159 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
GFRA1P56159 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GFRA1P56159 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GFRA1P56159 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GFRA1P56159 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.82■□□□□ 0.6
GFRA1P56159 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GFRA1P56159 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
GFRA1P56159 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFRA1P56159 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFRA1P56159 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.81■□□□□ 0.6
GFRA1P56159 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFRA1P56159 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFRA1P56159 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
GFRA1P56159 GPX1P1-201ENST00000388829 606 ntBASIC18.81■□□□□ 0.6
GFRA1P56159 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFRA1P56159 AC245052.3-201ENST00000450182 901 ntBASIC18.81■□□□□ 0.6
GFRA1P56159 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.81■□□□□ 0.6
GFRA1P56159 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.81■□□□□ 0.6
GFRA1P56159 AL162412.1-201ENST00000567129 965 ntBASIC18.81■□□□□ 0.6
GFRA1P56159 AC104771.1-201ENST00000603335 964 ntBASIC18.81■□□□□ 0.6
GFRA1P56159 AL121832.2-201ENST00000610979 668 ntBASIC18.81■□□□□ 0.6
GFRA1P56159 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.81■□□□□ 0.6
GFRA1P56159 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.81■□□□□ 0.6
GFRA1P56159 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
GFRA1P56159 AC244015.2-201ENST00000616358 1861 ntBASIC18.81■□□□□ 0.6
GFRA1P56159 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFRA1P56159 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.81■□□□□ 0.6
GFRA1P56159 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GFRA1P56159 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFRA1P56159 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.8■□□□□ 0.6
GFRA1P56159 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFRA1P56159 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFRA1P56159 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
GFRA1P56159 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFRA1P56159 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFRA1P56159 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms